Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14554 Brassica carinata HOM05D000003 ORTHO05D014927 1.2e-29 132.5 65 100.0
C02p20030 Brassica napus HOM05D000003 ORTHO05D014927 1.2e-29 132.5 65 100.0
C04p24260 Brassica napus HOM05D000003 ORTHO05D014927 3.4e-21 104.4 62 80.6
BolC4t23924H Brassica oleracea HOM05D000003 ORTHO05D014927 3.4e-21 104.4 62 80.6
C04p68880 Brassica napus HOM05D000003 ORTHO05D014927 1.0e-20 102.8 61 78.7
BraA08t32742Z Brassica rapa HOM05D000003 ORTHO05D014927 2.9e-20 101.3 64 75.0
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 3.8e-12 74.3 60 55.0
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-12 73.6 60 60.0
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 7.2e-11 70.1 60 55.0
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 7.2e-11 70.1 60 55.0
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 7.2e-11 70.1 60 55.0
A03p62850 Brassica napus HOM05D000003 ORTHO05D001498 9.3e-11 69.7 59 57.6
BolC4t22151H Brassica oleracea HOM05D000914 ORTHO05D000718 9.3e-11 69.7 62 58.1
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 9.3e-11 69.7 59 57.6
BcaC06g36398 Brassica carinata HOM05D000003 ORTHO05D014927 2.1e-10 68.6 58 53.4
C07p04560 Brassica napus HOM05D000003 ORTHO05D014927 2.1e-10 68.6 58 53.4
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 1.0e-09 66.2 58 53.4
BcaC09g49748 Brassica carinata HOM05D000003 ORTHO05D019978 1.1e-08 62.8 58 51.7
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 1.1e-08 62.8 62 46.8
C07p11460 Brassica napus HOM05D000003 ORTHO05D040554 1.1e-08 62.8 49 51.0
BolC7t41622H Brassica oleracea HOM05D000003 ORTHO05D040554 1.1e-08 62.8 49 51.0
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 1.1e-08 62.8 62 46.8
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-08 61.6 62 46.8
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 2.5e-08 61.6 50 56.0
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 2.5e-08 61.6 62 46.8
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 7.4e-08 60.1 62 45.2
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 9.7e-08 59.7 62 45.2
C08p04970 Brassica napus HOM05D009133 ORTHO05D019978 9.7e-08 59.7 62 43.5
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 9.7e-08 59.7 62 45.2
BraA10t42905Z Brassica rapa HOM05D000003 ORTHO05D001498 1.6e-07 58.9 59 47.5
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 3.7e-07 57.8 59 42.4
A03p66550 Brassica napus HOM05D000003 ORTHO05D016102 4.8e-07 57.4 50 50.0
BcaC02g09456 Brassica carinata HOM05D009133 ORTHO05D032371 6.3e-07 57.0 60 45.0
BolC8t47955H Brassica oleracea HOM05D000003 ORTHO05D001498 8.2e-07 56.6 60 45.0
BcaB07g33807 Brassica carinata HOM05D000003 ORTHO05D027300 2.4e-06 55.1 60 43.3
C06p00940 Brassica napus HOM05D009133 ORTHO05D019978 2.4e-06 55.1 62 40.3
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 4.1e-06 54.3 61 42.6
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-06 54.3 50 46.0
BcaB06g29528 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-06 53.9 61 42.6
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-06 53.9 58 43.1
BolC4t27694H Brassica oleracea HOM05D000003 ORTHO05D023979 5.3e-06 53.9 59 40.7
BcaB02g10016 Brassica carinata HOM05D000003 ORTHO05D019978 6.9e-06 53.5 61 42.6
BraA07t30824Z Brassica rapa HOM05D000003 ORTHO05D027722 9.0e-06 53.1 59 49.2
BraA08t33100Z Brassica rapa HOM05D009133 ORTHO05D019978 9.0e-06 53.1 58 39.7
BraA10t43963Z Brassica rapa HOM05D009133 ORTHO05D019978 9.0e-06 53.1 58 39.7
BraA10t45387Z Brassica rapa HOM05D000003 ORTHO05D027722 9.0e-06 53.1 59 49.2


User provided reference genes

Program Settings