Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14466 Brassica carinata HOM05D004576 ORTHO05D005321 4.0e-158 561.6 329 100.0
BolC2t08029H Brassica oleracea HOM05D004576 ORTHO05D005321 9.5e-128 460.7 379 77.3
Sp6g15160 Schrenkiella parvula HOM05D004576 ORTHO05D005321 5.4e-115 418.3 406 64.8
Thhalv10013705m.g Eutrema salsugineum HOM05D004576 ORTHO05D005321 2.1e-114 416.4 408 64.7
C09p42710 Brassica napus HOM05D004576 ORTHO05D005321 6.0e-114 414.8 408 63.5
A10p10480 Brassica napus HOM05D004576 ORTHO05D005321 1.7e-113 413.3 408 64.0
BolC9t57147H Brassica oleracea HOM05D004576 ORTHO05D005321 6.6e-113 411.4 408 63.0
BraA10t43131Z Brassica rapa HOM05D004576 ORTHO05D005321 1.5e-112 410.2 408 63.5
BcaC04g20518 Brassica carinata HOM05D004576 ORTHO05D005321 2.5e-112 409.5 405 63.7
Aa31LG9G16760 Aethionema arabicum HOM05D004576 ORTHO05D005321 3.6e-111 405.6 407 62.2
CARHR265990 Cardamine hirsuta HOM05D004576 ORTHO05D005321 8.1e-111 404.4 408 63.0
AL8G27600 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 6.4e-108 394.8 413 61.3
AL4G21090 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 2.7e-106 389.4 407 61.4
AT5G53000 Arabidopsis thaliana HOM05D004576 ORTHO05D005321 4.6e-106 388.7 408 61.5
Carub.0008s1320 Capsella rubella HOM05D004576 ORTHO05D005321 5.1e-105 385.2 408 60.8
THA.LOC104799972 Tarenaya hassleriana HOM05D004576 ORTHO05D005321 6.4e-100 368.2 405 57.3
Cpa.g.sc3.95 Carica papaya HOM05D004576 ORTHO05D005321 2.4e-91 339.7 399 51.4
Glyma.04G234900 Glycine max HOM05D004576 ORTHO05D005321 5.5e-91 338.6 404 52.0
Gohir.A05G415000 Gossypium hirsutum HOM05D004576 ORTHO05D005321 4.6e-90 335.5 403 51.1
VMungo1309G0981 Vigna mungo HOM05D005525 ORTHO05D005321 1.3e-89 334.0 402 51.7
GSVIVG01038559001 Vitis vinifera HOM05D004576 ORTHO05D005321 1.3e-89 334.0 404 52.2
Phvul.009G051900 Phaseolus vulgaris HOM05D004576 ORTHO05D005321 3.0e-89 332.8 404 52.0
Gohir.D04G001200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 3.9e-89 332.4 403 50.6
Gorai.012G002200 Gossypium raimondii HOM05D004576 ORTHO05D005321 3.9e-89 332.4 403 50.6
COL.COLO4_16771 Corchorus olitorius HOM05D004576 ORTHO05D005321 5.1e-89 332.0 418 48.6
Hund11655 Selenicereus undatus HOM05D004576 ORTHO05D005321 5.1e-89 332.0 403 48.9
Lalb_Chr11g0066931 Lupinus albus HOM05D004576 ORTHO05D005321 6.7e-89 331.6 400 49.2
CiPaw.06G045600 Carya illinoinensis HOM05D004576 ORTHO05D005321 1.5e-88 330.5 404 51.2
CANSAT21G1766 Cannabis sativa HOM05D004576 ORTHO05D005321 2.5e-88 329.7 408 50.7
Ca_16714_v3 Cicer arietinum L. HOM05D004576 ORTHO05D005321 5.6e-88 328.6 400 48.5
Thecc.03G200200 Theobroma cacao HOM05D004576 ORTHO05D005321 9.6e-88 327.8 403 51.4
Ah.07g205540 Amaranthus hybridus HOM05D004576 ORTHO05D005321 1.6e-87 327.0 403 48.6
Nitab4.5_0003555g0040 Nicotiana tabacum HOM05D004576 ORTHO05D005321 1.4e-86 323.9 406 48.8
PGR042G3016 Punica granatum HOM05D004576 ORTHO05D005321 2.4e-86 323.2 407 49.1
Psat5g076560 Pisum sativum HOM05D004576 ORTHO05D005321 4.0e-86 322.4 400 50.2
CSS0016084 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 5.3e-86 322.0 390 49.5
CAN.G575.13 Capsicum annuum HOM05D004576 ORTHO05D005321 9.0e-86 321.2 403 47.9
AL8G27540 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.2e-85 320.9 521 46.4
arahy.Tifrunner.gnm1.ann1.EHU7FT Arachis hypogaea HOM05D004576 ORTHO05D005321 1.2e-85 320.9 405 48.9
arahy.Tifrunner.gnm1.ann1.S03LBS Arachis hypogaea HOM05D004576 ORTHO05D005321 1.2e-85 320.9 405 48.9
Rhsim09G0206100 Rhododendron simsii HOM05D004576 ORTHO05D005321 1.2e-85 320.9 402 48.8
Prupe.2G309200 Prunus persica HOM05D004576 ORTHO05D005321 1.5e-85 320.5 404 48.8
EL10Ac3g05272 Beta vulgaris HOM05D004576 ORTHO05D005321 2.0e-85 320.1 403 48.4
Sopen01g002110 Solanum pennellii HOM05D004576 ORTHO05D005321 5.8e-85 318.5 406 48.5
Dinv35342 Davidia involucrata HOM05D004576 ORTHO05D005321 7.6e-85 318.2 403 48.4
Medtr3g091640 Medicago truncatula HOM05D004576 ORTHO05D005321 7.6e-85 318.2 403 50.1
Solyc01g006110.3 Solanum lycopersicum HOM05D004576 ORTHO05D005321 1.3e-84 317.4 406 48.3
Sc25g0000910 Simmondsia chinensis HOM05D004576 ORTHO05D005321 2.9e-84 316.2 405 50.1
Eucgr.A01454 Eucalyptus grandis HOM05D004576 ORTHO05D005321 4.9e-84 315.5 404 50.0
CAN.G140.19 Capsicum annuum HOM05D004576 ORTHO05D005321 1.4e-83 313.9 405 47.2
Migut.F00204 Erythranthe guttata HOM05D004576 ORTHO05D005321 1.4e-83 313.9 404 51.5
SGA_v2.0_scaffold192G40533 Striga asiatica HOM05D004576 ORTHO05D005321 1.9e-83 313.5 407 49.6
Lj4g0015379 Lotus japonicus HOM05D004576 ORTHO05D005321 2.5e-83 313.2 405 49.1
Atru.chr12.2224 Acer truncatum HOM05D004576 ORTHO05D005321 3.2e-83 312.8 403 47.6
Duzib068G0175 Durio zibethinus HOM05D004576 ORTHO05D005321 5.5e-83 312.0 403 48.1
PGSC0003DMG400032187 Solanum tuberosum HOM05D004576 ORTHO05D005321 5.5e-83 312.0 406 47.8
vmacro10126 Vaccinium macrocarpon HOM05D004576 ORTHO05D005321 9.3e-83 311.2 402 48.5
Haze_00204 Corylus avellana HOM05D004576 ORTHO05D005321 1.6e-82 310.5 400 47.8
FAN06G0548 Fragaria x ananassa HOM05D004576 ORTHO05D005321 2.7e-82 309.7 409 47.9
RcHm_v2.0_Chr1g0380451 Rosa chinensis HOM05D004576 ORTHO05D005321 2.7e-82 309.7 409 47.4
AUR62019411 Chenopodium quinoa HOM05D004576 ORTHO05D005321 3.5e-82 309.3 403 47.1
FvH4_7g31380 Fragaria vesca HOM05D004576 ORTHO05D005321 4.6e-82 308.9 409 47.7
FAN01G2495 Fragaria x ananassa HOM05D004576 ORTHO05D005321 4.6e-82 308.9 409 47.7
FAN06G1560 Fragaria x ananassa HOM05D004576 ORTHO05D005321 6.0e-82 308.5 408 48.0
MD01G1217800 Malus domestica HOM05D004576 ORTHO05D005321 1.0e-81 307.8 407 47.4
Cc02_g01450 Coffea canephora HOM05D004576 ORTHO05D005321 1.8e-81 307.0 405 48.4
Hma1.2p1_1587F.1_g292290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 2.3e-81 306.6 405 47.7
Manes.10G051900 Manihot esculenta HOM05D004576 ORTHO05D005321 2.3e-81 306.6 400 46.2
TWI39G0751 Tripterygium wilfordii HOM05D004576 ORTHO05D005321 2.3e-81 306.6 409 47.4
Manes.07G095000 Manihot esculenta HOM05D004576 ORTHO05D005321 5.1e-81 305.4 405 48.4
Actinidia06144 Actinidia chinensis HOM05D004576 ORTHO05D005321 6.7e-81 305.1 403 47.4
FAN03G3343 Fragaria x ananassa HOM05D004576 ORTHO05D005321 8.7e-81 304.7 409 47.9
Hma1.2p1_0404F.1_g145290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 8.7e-81 304.7 405 47.4
Hma1.2p1_1507F.1_g287630 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 1.1e-80 304.3 406 48.5
TPR.G18754 Trifolium pratense HOM05D004576 ORTHO05D005321 1.1e-80 304.3 389 47.3
CSS0008628 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 2.5e-80 303.1 406 47.0
Cfa016237 Carpinus fangiana HOM05D004576 ORTHO05D005321 2.5e-80 303.1 400 46.2
HPP92_010727 Vanilla planifolia HOM05D004576 ORTHO05D005321 2.5e-80 303.1 402 44.5
Nn1g00276 Nelumbo nucifera HOM05D004576 ORTHO05D005321 3.3e-80 302.8 405 46.7
Gohir.D12G250200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 7.4e-80 301.6 388 46.4
Gorai.008G268300 Gossypium raimondii HOM05D004576 ORTHO05D005321 7.4e-80 301.6 388 46.4
MD07G1287100 Malus domestica HOM05D004576 ORTHO05D005321 7.4e-80 301.6 406 47.3
MD07G1287400 Malus domestica HOM05D004576 ORTHO05D005321 7.4e-80 301.6 406 47.3
Potri.012G016500 Populus trichocarpa HOM05D004576 ORTHO05D005321 7.4e-80 301.6 408 48.3
ClCG09G018570 Citrullus lanatus HOM05D004576 ORTHO05D005321 9.7e-80 301.2 404 47.0
MELO3C021489.2 Cucumis melo HOM05D004576 ORTHO05D005321 1.6e-79 300.4 404 46.3
Aqoxy7G00528 Aquilegia oxysepala HOM05D004576 ORTHO05D005321 3.7e-79 299.3 405 47.4
DCAR_020325 Daucus carota HOM05D004576 ORTHO05D005321 4.8e-79 298.9 403 48.6
Gohir.A12G249400 Gossypium hirsutum HOM05D004576 ORTHO05D005321 6.3e-79 298.5 378 47.4
Nitab4.5_0005477g0060 Nicotiana tabacum HOM05D004576 ORTHO05D005321 6.3e-79 298.5 375 48.3
ECA238G3082 Erigeron canadensis HOM05D004576 ORTHO05D005321 1.1e-78 297.7 410 47.1
QL09p008710 Quercus lobata HOM05D004576 ORTHO05D005321 1.1e-78 297.7 441 44.4
C02p18880 Brassica napus HOM05D004576 ORTHO05D005321 3.1e-78 296.2 246 78.0
MSTRG.27022 Avicennia marina HOM05D004576 ORTHO05D005321 5.3e-78 295.4 403 48.1
Peaxi162Scf00441g00115 Petunia axillaris HOM05D004576 ORTHO05D005321 9.0e-78 294.7 403 47.6
Lsat_1_v5_gn_2_136141 Lactuca sativa HOM05D004576 ORTHO05D005321 1.2e-77 294.3 402 47.3
Sed0009575 Sechium edule HOM05D004576 ORTHO05D005321 1.5e-77 293.9 405 45.2
TAR633G0881 Trochodendron aralioides HOM05D004576 ORTHO05D005321 2.6e-77 293.1 405 45.2
Sed0014456 Sechium edule HOM05D004576 ORTHO05D005321 7.6e-77 291.6 405 45.7
Ciclev10020388m.g Citrus clementina HOM05D004576 ORTHO05D005321 1.0e-76 291.2 413 45.3
CsaV3_5G037660 Cucumis sativus L. HOM05D004576 ORTHO05D005321 1.7e-76 290.4 404 44.8
HanXRQChr07g0206441 Helianthus annuus HOM05D004576 ORTHO05D005321 1.7e-76 290.4 409 45.0
Zm00001eb093250 Zea mays HOM05D004576 ORTHO05D005321 1.7e-76 290.4 401 45.4
SalBow4G0465 Salvia bowleyana HOM05D004576 ORTHO05D005321 2.9e-76 289.7 450 42.4
TAR629G2734 Trochodendron aralioides HOM05D004576 ORTHO05D005321 3.8e-76 289.3 410 45.1
PSO063G4456 Papaver somniferum HOM05D004576 ORTHO05D005321 8.5e-76 288.1 406 43.3
Potri.015G012200 Populus trichocarpa HOM05D004576 ORTHO05D005321 1.1e-75 287.7 407 47.7
ATR0763G025 Amborella trichopoda HOM05D004576 ORTHO05D005321 1.9e-75 287.0 405 45.7
Os12g0137500 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 3.2e-75 286.2 401 45.1
AUR62006083 Chenopodium quinoa HOM05D004576 ORTHO05D005321 1.8e-73 280.4 403 43.9
Lsat_1_v5_gn_3_139541 Lactuca sativa HOM05D004576 ORTHO05D005321 9.7e-72 274.6 410 48.8
Oeu023658.2 Olea europaea HOM05D004576 ORTHO05D005321 2.8e-71 273.1 451 42.1
Oeu041059.3 Olea europaea HOM05D004576 ORTHO05D005321 3.7e-71 272.7 441 42.9
unitig_748.g7294 Utricularia gibba HOM05D004576 ORTHO05D005321 1.5e-69 267.3 402 43.5
PSO170G5996 Papaver somniferum HOM05D004576 ORTHO05D005321 2.0e-69 266.9 406 41.1
SEGI_39808 Sequoiadendron giganteum HOM05D004576 ORTHO05D005321 2.6e-69 266.5 402 42.5
MBI06_g10867_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 5.9e-69 265.4 429 40.3
Lj3C903T12 Lonicera japonica HOM05D004576 ORTHO05D005321 5.0e-68 262.3 378 47.6
CDE02G4477 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 7.2e-67 258.5 399 40.9
Zm00001eb196410 Zea mays HOM05D004576 ORTHO05D005321 7.2e-67 258.5 411 41.8
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 5.7e-64 248.8 341 46.9
Sabra15G0009800 Salix brachista HOM05D004576 ORTHO05D005321 5.0e-60 235.7 408 42.2
Medtr1g050518 Medicago truncatula HOM05D004576 ORTHO05D005321 8.5e-60 235.0 295 51.2
PGSC0003DMG400004286 Solanum tuberosum HOM05D004576 ORTHO05D005321 8.5e-60 235.0 298 48.7
PSO170G4165 Papaver somniferum HOM05D004576 ORTHO05D005321 1.6e-58 230.7 350 41.1
Nitab4.5_0001620g0020 Nicotiana tabacum HOM05D004576 ORTHO05D005321 1.0e-57 228.0 405 41.0
SMO118G0543 Selaginella moellendorffii HOM05D004576 ORTHO05D005321 7.4e-56 221.9 399 36.8
Os11g0141000 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 1.7e-55 220.7 378 40.2
Pp3c27_2200 Physcomitrium patens HOM05D004576 ORTHO05D005321 1.7e-55 220.7 399 37.8
Pp3c27_2230 Physcomitrium patens HOM05D004576 ORTHO05D005321 1.7e-55 220.7 399 37.8
SHI02368 Sapria himalayana HOM05D004576 ORTHO05D005321 4.8e-55 219.2 424 38.7
AagrBONN_evm.TU.Sc2ySwM_368.1428 Anthoceros agrestis HOM05D004576 ORTHO05D005321 2.9e-44 183.3 393 34.1
CiPaw.05G197500 Carya illinoinensis HOM05D004576 ORTHO05D005321 6.5e-44 182.2 372 40.1
Mapoly0036s0077 Marchantia polymorpha HOM05D004576 ORTHO05D005321 8.5e-44 181.8 400 35.0
AL4G21010 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.8e-41 174.1 165 61.8
Dinv29270 Davidia involucrata HOM05D004576 ORTHO05D005321 3.5e-37 159.8 172 53.5
MBI07_g24780_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 2.1e-34 150.6 317 35.6
CBR_g54194 Chara braunii HOM05D004576 ORTHO05D005321 3.6e-34 149.8 429 30.8
MBI07_g45568_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 1.4e-25 121.3 270 35.6
AL4G21000 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.1e-22 111.7 137 52.6
AL4G21040 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 8.6e-20 102.1 144 49.3
SGA_v2.0_scaffold44G16809 Striga asiatica HOM05D004576 ORTHO05D005321 8.6e-20 102.1 122 48.4
CSS0039200 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 1.8e-17 94.4 70 64.3
BcaB05g21998 Brassica carinata HOM05D004576 ORTHO05D005321 8.9e-17 92.0 204 38.2
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 2.6e-16 90.5 59 69.5
Lj1g0016726 Lotus japonicus HOM05D004576 ORTHO05D005321 1.2e-13 81.6 92 52.2
ATR0602G122 Amborella trichopoda HOM05D004576 ORTHO05D005321 1.9e-11 74.3 63 58.7
ATR0602G017 Amborella trichopoda HOM05D004576 ORTHO05D005321 1.6e-10 71.2 73 45.2
Actinidia08655 Actinidia chinensis HOM05D004576 ORTHO05D005321 3.6e-10 70.1 59 57.6
TAR636G2906 Trochodendron aralioides HOM05D004576 ORTHO05D005321 6.2e-10 69.3 82 47.6
MCO15G223 Micromonas commoda HOM05D004576 ORTHO05D005321 8.1e-10 68.9 402 26.6
CAN.G140.18 Capsicum annuum HOM05D004576 ORTHO05D005321 7.5e-08 62.4 69 46.4


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