Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14435 Brassica carinata HOM05D000497 ORTHO05D000020 6.8e-60 233.8 118 100.0
BcaC03g14436 Brassica carinata HOM05D000497 ORTHO05D000020 6.8e-60 233.8 118 100.0
BcaC03g14437 Brassica carinata HOM05D000497 ORTHO05D000020 6.8e-60 233.8 118 100.0
C02p18490 Brassica napus HOM05D000497 ORTHO05D000020 6.8e-60 233.8 118 100.0
BolC2t07990H Brassica oleracea HOM05D000497 ORTHO05D000020 6.8e-60 233.8 118 100.0
A02p11160 Brassica napus HOM05D000497 ORTHO05D000020 7.3e-54 213.8 118 93.2
BraA02t06179Z Brassica rapa HOM05D000497 ORTHO05D000020 7.3e-54 213.8 118 93.2
BcaB05g22030 Brassica carinata HOM05D000497 ORTHO05D000020 1.8e-52 209.1 118 89.0
Sp6g15440 Schrenkiella parvula HOM05D000497 ORTHO05D000020 2.8e-45 185.3 119 80.7
A10p10810 Brassica napus HOM05D000497 ORTHO05D000020 3.6e-45 184.9 118 79.7
BraA10t43165Z Brassica rapa HOM05D000497 ORTHO05D000020 3.6e-45 184.9 118 79.7
C09p43100 Brassica napus HOM05D000497 ORTHO05D000020 2.0e-43 179.1 118 78.0
BolC9t57181H Brassica oleracea HOM05D000497 ORTHO05D000020 2.0e-43 179.1 118 78.0
BcaC04g20476 Brassica carinata HOM05D000497 ORTHO05D000020 1.7e-42 176.0 118 77.1
Thhalv10013898m.g Eutrema salsugineum HOM05D000497 ORTHO05D000020 3.7e-42 174.9 125 76.0
BcaB08g35689 Brassica carinata HOM05D000497 ORTHO05D000020 4.9e-42 174.5 116 75.9
AT5G53290 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 3.2e-41 171.8 115 73.9
AL8G27990 Arabidopsis lyrata HOM05D000497 ORTHO05D000020 1.3e-39 166.4 115 73.9
CARHR266330 Cardamine hirsuta HOM05D000497 ORTHO05D000020 4.7e-37 157.9 114 74.6
BcaC01g06239 Brassica carinata HOM05D000497 ORTHO05D000020 2.3e-31 139.0 117 65.8
A03p15220 Brassica napus HOM05D000497 ORTHO05D000020 2.3e-31 139.0 117 65.8
C03p17780 Brassica napus HOM05D000497 ORTHO05D000020 2.3e-31 139.0 117 65.8
BolC3t14185H Brassica oleracea HOM05D000497 ORTHO05D000020 2.3e-31 139.0 117 65.8
BraA03t10815Z Brassica rapa HOM05D000497 ORTHO05D000020 2.3e-31 139.0 117 65.8
Carub.0008s1347 Capsella rubella HOM05D000497 ORTHO05D000020 8.6e-31 137.1 118 64.4
BcaB01g04240 Brassica carinata HOM05D000497 ORTHO05D000020 1.5e-30 136.3 119 66.4
Aa31LG3G9240 Aethionema arabicum HOM05D000497 ORTHO05D000020 7.6e-19 97.4 114 52.6
Carub.0007s1288 Capsella rubella HOM05D000497 ORTHO05D000020 8.4e-18 94.0 113 49.6
AL7G24690 Arabidopsis lyrata HOM05D000497 ORTHO05D000020 7.1e-17 90.9 113 50.4
AT4G27950 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 1.2e-16 90.1 113 48.7
Thhalv10025693m.g Eutrema salsugineum HOM05D000497 ORTHO05D000020 6.7e-15 84.3 104 51.0
CARHR235640 Cardamine hirsuta HOM05D000497 ORTHO05D000020 1.1e-14 83.6 118 48.3
Sp7g25910 Schrenkiella parvula HOM05D000497 ORTHO05D000020 3.7e-13 78.6 119 44.5
BcaNung01607 Brassica carinata HOM05D000497 ORTHO05D000020 1.1e-12 77.0 96 47.9
BcaC07g38301 Brassica carinata HOM05D000497 ORTHO05D000020 1.2e-11 73.6 118 48.3
A08p20280 Brassica napus HOM05D000497 ORTHO05D000020 1.2e-11 73.6 118 48.3
C08p10470 Brassica napus HOM05D000497 ORTHO05D000020 1.2e-11 73.6 118 48.3
BolC7t46061H Brassica oleracea HOM05D000497 ORTHO05D000020 1.2e-11 73.6 117 43.6
BolC8t48729H Brassica oleracea HOM05D000497 ORTHO05D000020 1.2e-11 73.6 118 48.3
BraA08t33987Z Brassica rapa HOM05D000497 ORTHO05D000020 1.2e-11 73.6 118 48.3
A03p57610 Brassica napus HOM05D000497 ORTHO05D000020 1.5e-11 73.2 83 53.0
BraA03t14828Z Brassica rapa HOM05D000497 ORTHO05D000020 1.5e-11 73.2 83 53.0
BcaC06g32655 Brassica carinata HOM05D000497 ORTHO05D000020 2.6e-11 72.4 117 43.6
C07p55820 Brassica napus HOM05D000497 ORTHO05D000020 2.6e-11 72.4 117 43.6
A01p19350 Brassica napus HOM05D000497 ORTHO05D000020 1.3e-10 70.1 117 41.9
BraA01t01876Z Brassica rapa HOM05D000497 ORTHO05D000020 1.3e-10 70.1 117 41.9
BcaC09g50524 Brassica carinata HOM05D000497 ORTHO05D000020 4.9e-10 68.2 117 41.0
C01p24410 Brassica napus HOM05D000497 ORTHO05D000020 4.9e-10 68.2 117 41.0
BolC1t02387H Brassica oleracea HOM05D000497 ORTHO05D000020 4.9e-10 68.2 117 41.0
BcaB03g12548 Brassica carinata HOM05D000497 ORTHO05D000020 6.4e-10 67.8 119 42.9
THA.LOC104813277 Tarenaya hassleriana HOM05D000497 ORTHO05D000020 7.1e-09 64.3 110 42.7
THA.LOC104800285 Tarenaya hassleriana HOM05D000497 ORTHO05D000020 3.3e-06 55.5 81 43.2


User provided reference genes

Program Settings