Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14236 Brassica carinata HOM05D003788 ORTHO05D004633 0.0e+00 1351.3 798 100.0
C02p15420 Brassica napus HOM05D003788 ORTHO05D004633 0.0e+00 1309.7 792 94.9
BolC2t07656H Brassica oleracea HOM05D003788 ORTHO05D004633 0.0e+00 1309.7 792 94.9
A02p09290 Brassica napus HOM05D003788 ORTHO05D004633 2.4e-310 1068.5 813 81.3
BraA02t05991Z Brassica rapa HOM05D003788 ORTHO05D004633 5.4e-310 1067.4 814 81.2
BcaB05g22251 Brassica carinata HOM05D003788 ORTHO05D004633 1.2e-269 933.3 855 70.1
AL8G31870 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 7.0e-233 811.2 884 62.0
Carub.0008s1656 Capsella rubella HOM05D003788 ORTHO05D004633 8.5e-231 804.3 894 59.5
AT5G56240 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 5.2e-228 795.0 880 61.0
Thhalv10012573m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 3.5e-216 755.7 880 60.9
BraA03t10668Z Brassica rapa HOM05D003788 ORTHO05D004633 2.9e-215 752.7 853 63.4
AL191U10030 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 7.2e-214 748.0 880 59.0
A03p13640 Brassica napus HOM05D003788 ORTHO05D004633 4.0e-212 742.3 872 62.3
C09p47480 Brassica napus HOM05D003788 ORTHO05D004633 5.6e-206 721.8 851 58.9
C03p15990 Brassica napus HOM05D003788 ORTHO05D004633 6.8e-204 714.9 827 60.1
BcaC01g06409 Brassica carinata HOM05D003788 ORTHO05D004633 2.0e-203 713.4 829 59.7
BolC9t57603H Brassica oleracea HOM05D003788 ORTHO05D004633 4.9e-202 708.8 855 58.4
BolC3t14027H Brassica oleracea HOM05D003788 ORTHO05D004633 8.3e-202 708.0 829 59.2
BraA10t43453Z Brassica rapa HOM05D003788 ORTHO05D004633 4.1e-201 705.7 860 58.7
A10p13490 Brassica napus HOM05D003788 ORTHO05D004633 2.0e-200 703.4 860 58.6
BcaB01g04386 Brassica carinata HOM05D003788 ORTHO05D004633 1.2e-197 694.1 807 63.8
BcaC04g20117 Brassica carinata HOM05D003788 ORTHO05D004633 1.7e-194 683.7 851 57.1
Sp6g18090 Schrenkiella parvula HOM05D003788 ORTHO05D004633 1.7e-194 683.7 707 65.9
CARHR269640 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.5e-174 617.5 834 54.4
Aa31LG3G12140 Aethionema arabicum HOM05D003788 ORTHO05D004633 5.5e-153 545.8 920 48.8
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 6.8e-103 379.4 813 42.9
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 1.5e-102 378.3 875 39.5
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 2.8e-101 374.0 912 39.8
AL8G31880 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 1.2e-99 368.6 873 39.2
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 3.5e-99 367.1 808 40.0
Sp6g18100 Schrenkiella parvula HOM05D003788 ORTHO05D004633 7.2e-97 359.4 871 39.0
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 1.0e-95 355.5 813 40.3
BcaC01g06410 Brassica carinata HOM05D003788 ORTHO05D004633 6.0e-83 313.2 828 35.9
BcaB05g22252 Brassica carinata HOM05D003788 ORTHO05D004633 1.3e-82 312.0 843 37.4
C03p15980 Brassica napus HOM05D003788 ORTHO05D004633 1.3e-82 312.0 828 35.6
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 1.6e-80 305.1 828 36.2
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 3.6e-80 303.9 815 35.2
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 6.2e-80 303.1 828 35.7
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 1.8e-79 301.6 806 35.2
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 2.3e-79 301.2 828 36.0
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 4.4e-78 297.0 827 36.0
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 6.4e-77 293.1 764 37.3
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 2.4e-76 291.2 847 35.8
C09p47500 Brassica napus HOM05D003788 ORTHO05D004633 9.9e-62 242.7 756 35.1
CSS0001498 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 2.4e-47 194.9 1010 27.9
CSS0046183 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 3.1e-47 194.5 1011 27.9
BcaC04g20115 Brassica carinata HOM05D003788 ORTHO05D004633 1.1e-44 186.0 621 33.3
BolC9t57606H Brassica oleracea HOM05D003788 ORTHO05D004633 1.1e-44 186.0 621 33.3
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 1.1e-39 169.5 897 27.6
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 9.0e-39 166.4 1050 27.4
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 1.2e-38 166.0 1053 26.9
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 1.5e-38 165.6 1070 27.1
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 2.0e-38 165.2 1041 26.1
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 2.6e-38 164.9 1112 27.0
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 2.6e-38 164.9 1122 27.0
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 5.8e-38 163.7 1051 26.1
PGR031G1033 Punica granatum HOM05D003788 ORTHO05D004633 1.3e-37 162.5 1029 26.5
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 4.9e-37 160.6 1034 26.4
Sopen07g034380 Solanum pennellii HOM05D003788 ORTHO05D004633 8.4e-37 159.8 976 26.3
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 1.1e-36 159.5 1139 25.5
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 1.1e-36 159.5 909 27.2
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 4.2e-36 157.5 1033 25.8
PGSC0003DMG400022144 Solanum tuberosum HOM05D003788 ORTHO05D004633 4.2e-36 157.5 975 27.1
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 7.1e-36 156.8 1039 27.1
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 1.2e-35 156.0 1048 26.0
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 1.2e-35 156.0 503 32.0
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.6e-35 155.6 970 26.4
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 2.7e-35 154.8 1050 25.5
Solyc07g066200.4 Solanum lycopersicum HOM05D003788 ORTHO05D004633 2.7e-35 154.8 976 26.2
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 7.9e-35 153.3 476 31.9
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 1.8e-34 152.1 418 33.0
A10p13510 Brassica napus HOM05D003788 ORTHO05D004633 6.7e-34 150.2 683 31.2
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 6.7e-34 150.2 530 30.6
Migut.M01579 Erythranthe guttata HOM05D003788 ORTHO05D004633 8.7e-34 149.8 338 34.6
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 1.9e-33 148.7 482 31.5
ClCG00G001230 Citrullus lanatus HOM05D003788 ORTHO05D004633 3.3e-33 147.9 432 34.7
Gorai.004G034500 Gossypium raimondii HOM05D003788 ORTHO05D004633 4.3e-33 147.5 996 25.0
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 9.6e-33 146.4 1050 25.1
MD03G1043400 Malus domestica HOM05D003788 ORTHO05D004633 1.3e-32 146.0 1052 25.6
CsaV3_3G003820 Cucumis sativus L. HOM05D003788 ORTHO05D004633 2.1e-32 145.2 439 32.3
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 2.1e-32 145.2 437 32.5
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 2.8e-32 144.8 1087 25.1
Gohir.D08G036500 Gossypium hirsutum HOM05D003788 ORTHO05D004633 2.8e-32 144.8 995 25.8
CiPaw.11G210900 Carya illinoinensis HOM05D003788 ORTHO05D004633 4.8e-32 144.1 1092 24.2
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 6.2e-32 143.7 1000 25.3
Cfa016964 Carpinus fangiana HOM05D003788 ORTHO05D004633 8.2e-32 143.3 1096 25.1
Cc05_g15760 Coffea canephora HOM05D003788 ORTHO05D004633 8.2e-32 143.3 496 33.1
FAN21G2445 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.1e-31 142.9 992 25.2
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 2.4e-31 141.7 494 30.0
Haze_09919 Corylus avellana HOM05D003788 ORTHO05D004633 5.3e-31 140.6 1043 24.7
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 9.0e-31 139.8 766 27.2
MELO3C014063.2 Cucumis melo HOM05D003788 ORTHO05D004633 1.5e-30 139.0 440 34.3
Oeu052883.2 Olea europaea HOM05D003788 ORTHO05D004633 1.5e-30 139.0 502 31.9
FvH4_3g41530 Fragaria vesca HOM05D003788 ORTHO05D004633 2.6e-30 138.3 998 25.8
Hma1.2p1_0321F.1_g124360 Hydrangea macrophylla HOM05D003788 ORTHO05D004633 2.6e-30 138.3 364 33.5
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 4.5e-30 137.5 1000 25.5
FAN11G0056 Fragaria x ananassa HOM05D003788 ORTHO05D004633 7.6e-30 136.7 1001 26.0
RcHm_v2.0_Chr5g0074531 Rosa chinensis HOM05D003788 ORTHO05D004633 3.8e-29 134.4 993 25.0
Nitab4.5_0001732g0050 Nicotiana tabacum HOM05D003788 ORTHO05D004633 5.0e-29 134.0 387 32.6
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 5.0e-29 134.0 480 32.3
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 5.0e-29 134.0 1071 25.6
Migut.H01707 Erythranthe guttata HOM05D003788 ORTHO05D004633 6.5e-29 133.7 707 27.3
unitig_37.g12213 Utricularia gibba HOM05D003788 ORTHO05D004633 8.4e-29 133.3 363 35.0
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 1.1e-28 132.9 356 33.1
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 1.9e-28 132.1 422 30.6
Peaxi162Scf00232g00078 Petunia axillaris HOM05D003788 ORTHO05D004633 2.5e-28 131.7 837 26.4
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 3.2e-28 131.3 540 28.9
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 3.2e-28 131.3 825 24.6
MSTRG.16130 Avicennia marina HOM05D003788 ORTHO05D004633 4.2e-28 131.0 359 34.0
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 1.2e-27 129.4 411 30.9
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 1.2e-27 129.4 403 31.5
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 1.6e-27 129.0 369 30.4
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 1.6e-27 129.0 1101 26.2
Dinv19640 Davidia involucrata HOM05D003788 ORTHO05D004633 2.1e-27 128.6 534 29.2
Sed0020897 Sechium edule HOM05D003788 ORTHO05D004633 2.1e-27 128.6 472 30.1
CARHR218680 Cardamine hirsuta HOM05D003788 ORTHO05D004633 2.7e-27 128.3 195 48.7
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 2.7e-27 128.3 403 31.0
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 2.7e-27 128.3 1055 25.3
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 6.1e-27 127.1 414 31.4
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 6.1e-27 127.1 1031 24.2
Sc03g0011790 Simmondsia chinensis HOM05D003788 ORTHO05D004633 6.1e-27 127.1 362 33.7
ClCG10G003840 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.0e-26 126.3 1042 26.2
ClCG10G003960 Citrullus lanatus HOM05D003788 ORTHO05D004633 2.3e-26 125.2 1042 26.2
THA.LOC104810306 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 2.3e-26 125.2 943 25.5
Actinidia31533 Actinidia chinensis HOM05D003788 ORTHO05D004633 3.0e-26 124.8 1000 23.2
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 3.0e-26 124.8 421 29.5
unitig_46.g18528 Utricularia gibba HOM05D003788 ORTHO05D004633 3.0e-26 124.8 350 34.3
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 3.0e-26 124.8 398 29.4
Lsat_1_v5_gn_9_88661 Lactuca sativa HOM05D003788 ORTHO05D004633 8.7e-26 123.2 727 26.1
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 8.7e-26 123.2 446 31.4
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 1.5e-25 122.5 835 27.9
HanXRQChr11g0346921 Helianthus annuus HOM05D003788 ORTHO05D004633 3.3e-25 121.3 486 29.2
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 7.4e-25 120.2 430 30.9
Oeu015274.1 Olea europaea HOM05D003788 ORTHO05D004633 7.4e-25 120.2 972 24.1
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 9.7e-25 119.8 397 31.7
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 1.6e-24 119.0 336 30.1
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 2.2e-24 118.6 352 30.7
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 2.2e-24 118.6 456 29.4
Zm00001eb424700 Zea mays HOM05D003788 ORTHO05D004633 2.2e-24 118.6 418 29.2
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 3.7e-24 117.9 394 30.2
CiPaw.12G143000 Carya illinoinensis HOM05D003788 ORTHO05D004633 4.8e-24 117.5 857 25.7
ECA240G4117 Erigeron canadensis HOM05D003788 ORTHO05D004633 8.2e-24 116.7 855 23.7
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 1.1e-23 116.3 433 28.4
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 1.1e-23 116.3 353 32.9
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 1.8e-23 115.5 498 29.3
vmacro11644 Vaccinium macrocarpon HOM05D003788 ORTHO05D004633 1.8e-23 115.5 943 24.3
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.8e-23 115.5 522 27.0
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 4.1e-23 114.4 252 36.1
Aqoxy4G02274 Aquilegia oxysepala HOM05D003788 ORTHO05D004633 9.0e-23 113.2 517 28.4
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 9.0e-23 113.2 376 28.7
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 2.6e-22 111.7 446 29.8
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 3.4e-22 111.3 450 29.3
Actinidia30346 Actinidia chinensis HOM05D003788 ORTHO05D004633 4.5e-22 110.9 379 32.2
Lj1A901G37 Lonicera japonica HOM05D003788 ORTHO05D004633 7.7e-22 110.2 946 23.7
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 5.0e-21 107.5 473 28.1
Lj8C184G1 Lonicera japonica HOM05D003788 ORTHO05D004633 1.4e-20 105.9 417 27.8
Lsat_1_v5_gn_7_115701 Lactuca sativa HOM05D003788 ORTHO05D004633 1.9e-20 105.5 875 24.3
BraA02t05990Z Brassica rapa HOM05D003788 ORTHO05D004633 4.2e-20 104.4 201 45.3
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 6.7e-18 97.1 414 27.8
Actinidia30347 Actinidia chinensis HOM05D003788 ORTHO05D004633 4.3e-17 94.4 158 38.6
CDE06G0258 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 4.1e-15 87.8 146 38.4
MSTRG.13048 Avicennia marina HOM05D003788 ORTHO05D004633 9.1e-15 86.7 801 23.5
Cc05_g15750 Coffea canephora HOM05D003788 ORTHO05D004633 1.0e-10 73.2 162 35.8
HPP92_007487 Vanilla planifolia HOM05D003788 ORTHO05D004633 2.2e-08 65.5 169 28.4
MBI14_g12743_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 4.1e-07 61.2 133 34.6
BcaC03g16336 Brassica carinata HOM05D021359 ORTHO05D016065 9.1e-07 60.1 91 40.7
CDE05G2211 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 9.1e-07 60.1 350 27.1


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