Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14227 Brassica carinata HOM05D003591 ORTHO05D005681 4.3e-33 144.1 71 100.0
BcaC07g40267 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-31 139.0 71 97.2
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 2.8e-16 88.2 53 81.1
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 2.8e-16 88.2 53 81.1
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 2.8e-16 88.2 53 81.1
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 2.8e-16 88.2 53 81.1
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 3.6e-16 87.8 53 81.1
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 4.7e-16 87.4 58 74.1
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-15 86.3 53 79.2
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-15 86.3 53 79.2
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-15 86.3 53 81.1
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-15 86.3 53 79.2
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-15 86.3 53 79.2
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 1.4e-15 85.9 68 64.7
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 77.4
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-15 85.5 53 79.2
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-15 85.1 53 79.2
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 3.1e-15 84.7 53 77.4
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 4.0e-15 84.3 53 77.4
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 4.0e-15 84.3 53 77.4
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 4.0e-15 84.3 53 77.4
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 4.0e-15 84.3 53 77.4
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 5.2e-15 84.0 53 77.4
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-15 84.0 53 77.4
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-15 84.0 53 77.4
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-15 84.0 53 75.5
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-15 84.0 53 75.5
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 6.8e-15 83.6 53 75.5
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 6.8e-15 83.6 53 77.4
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-14 82.8 53 77.4
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-14 82.8 53 77.4
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 1.5e-14 82.4 53 77.4
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 2.0e-14 82.0 53 75.5
BcaC09g48473 Brassica carinata HOM05D003591 ORTHO05D092369 2.0e-14 82.0 40 97.5
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 2.0e-14 82.0 52 76.9
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-14 82.0 53 77.4
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 4.4e-14 80.9 53 73.6
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-14 80.9 53 73.6
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-14 80.9 53 73.6
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-14 80.9 53 73.6
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 5.8e-14 80.5 53 77.4
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 1.7e-13 79.0 53 73.6
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-13 79.0 53 73.6
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 2.2e-13 78.6 53 75.5
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-13 78.6 53 75.5
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 2.2e-13 78.6 53 75.5
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-13 77.8 53 75.5
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 4.9e-13 77.4 49 73.5
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-12 76.3 53 75.5
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-12 75.9 53 71.7
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 7.1e-12 73.6 53 69.8
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-11 72.8 51 68.6
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 2.1e-11 72.0 47 72.3
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-09 65.5 53 62.3
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 5.6e-09 63.9 65 55.4
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 5.6e-09 63.9 65 55.4
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 9.5e-09 63.2 65 53.8
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-08 62.0 65 53.8
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-08 62.0 67 53.7
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 56.6
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.0 53 62.3
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 2.8e-08 61.6 65 52.3
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 3.6e-08 61.2 53 60.4
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 3.6e-08 61.2 53 60.4
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 3.6e-08 61.2 53 62.3
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 3.6e-08 61.2 53 62.3
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 3.6e-08 61.2 53 62.3
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-08 60.5 49 63.3
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 6.2e-08 60.5 49 63.3
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-08 60.5 49 63.3
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-08 60.5 49 63.3
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-08 60.5 49 63.3
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 6.2e-08 60.5 49 63.3
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 6.2e-08 60.5 53 60.4
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 8.1e-08 60.1 53 60.4
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-07 59.7 45 64.4
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-07 59.7 39 74.4
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-07 59.3 44 63.6
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-07 58.9 26 100.0
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 1.8e-07 58.9 53 60.4
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-07 58.5 53 54.7
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 5.2e-07 57.4 53 56.6
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 8.9e-07 56.6 53 52.8
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-06 54.7 53 54.7
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 7.6e-06 53.5 44 63.6
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 9.9e-06 53.1 46 58.7
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 9.9e-06 53.1 43 65.1


User provided reference genes

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