Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14052 Brassica carinata HOM05D000026 ORTHO05D027236 6.5e-58 227.3 120 100.0
BolC2t07394H Brassica oleracea HOM05D000026 ORTHO05D027236 2.6e-38 162.2 82 100.0
BolC2t07383H Brassica oleracea HOM05D000026 ORTHO05D027236 2.2e-26 122.5 76 85.5
C02p12870 Brassica napus HOM05D000026 ORTHO05D027236 6.5e-26 120.9 76 84.2
BcaB05g22475 Brassica carinata HOM05D000026 ORTHO05D000094 4.7e-24 114.8 76 78.9
C02p12880 Brassica napus HOM05D000026 ORTHO05D000094 3.0e-23 112.1 76 75.0
A02p07370 Brassica napus HOM05D000026 ORTHO05D000094 8.8e-23 110.5 76 73.7
BraA02t05816Z Brassica rapa HOM05D000026 ORTHO05D000094 8.8e-23 110.5 76 73.7
BcaC03g14041 Brassica carinata HOM05D000026 ORTHO05D000094 1.7e-21 106.3 76 73.7
BolC2t07381H Brassica oleracea HOM05D000026 ORTHO05D000094 1.7e-21 106.3 76 73.7
BcaC03g14043 Brassica carinata HOM05D000026 ORTHO05D000094 4.8e-21 104.8 84 67.9
BolC2t07385H Brassica oleracea HOM05D000026 ORTHO05D000094 4.8e-21 104.8 84 67.9
BcaC03g14050 Brassica carinata HOM05D000026 ORTHO05D000094 2.4e-20 102.4 76 69.7
BolC2t07392H Brassica oleracea HOM05D000026 ORTHO05D000094 2.4e-20 102.4 76 69.7
C02p12850 Brassica napus HOM05D000026 ORTHO05D000094 3.1e-20 102.1 76 71.1
Thhalv10015412m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 1.2e-19 100.1 76 71.1
Thhalv10015381m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 5.0e-18 94.7 78 66.7
Sp6g20740 Schrenkiella parvula HOM05D000026 ORTHO05D000094 3.0e-15 85.5 112 49.1
CARHR285260 Cardamine hirsuta HOM05D000026 ORTHO05D000094 8.8e-15 84.0 76 59.2
SpUn0001_0810 Schrenkiella parvula HOM05D000026 ORTHO05D000094 8.8e-15 84.0 100 53.0
A10p16290 Brassica napus HOM05D000026 ORTHO05D000094 2.6e-14 82.4 76 59.2
BraA10t43711Z Brassica rapa HOM05D000026 ORTHO05D000094 2.6e-14 82.4 76 59.2
CARHR285280 Cardamine hirsuta HOM05D000026 ORTHO05D000094 1.3e-13 80.1 76 56.6
Aa31LG1G11950 Aethionema arabicum HOM05D000026 ORTHO05D000094 4.8e-13 78.2 76 57.9
BraA09t40956Z Brassica rapa HOM05D000026 ORTHO05D000094 5.4e-12 74.7 76 59.2
C08p38520 Brassica napus HOM05D000026 ORTHO05D000094 9.1e-12 73.9 76 57.9
BolC8t51424H Brassica oleracea HOM05D000026 ORTHO05D000094 9.1e-12 73.9 76 57.9
CARHR059810 Cardamine hirsuta HOM05D000026 ORTHO05D000094 9.1e-12 73.9 76 56.6
AT5G59270 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 2.7e-11 72.4 76 57.9
AL2G25850 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 4.5e-11 71.6 76 56.6
AT5G59260 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 4.5e-11 71.6 75 53.3
Carub.0008s1969 Capsella rubella HOM05D000026 ORTHO05D000094 2.9e-10 68.9 76 55.3
AL8G35430 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 5.0e-10 68.2 112 43.8
BcaB08g36293 Brassica carinata HOM05D000026 ORTHO05D000094 6.6e-10 67.8 112 44.6
A09p55540 Brassica napus HOM05D000026 ORTHO05D000094 6.6e-10 67.8 76 52.6
CARHR285270 Cardamine hirsuta HOM05D000026 ORTHO05D000094 6.6e-10 67.8 76 51.3
BcaC07g40854 Brassica carinata HOM05D000026 ORTHO05D000094 8.6e-10 67.4 76 52.6
C09p51320 Brassica napus HOM05D000026 ORTHO05D000094 2.5e-09 65.9 112 44.6
BcaB08g36294 Brassica carinata HOM05D000026 ORTHO05D000094 1.2e-08 63.5 112 43.8
THA.LOC104810754 Tarenaya hassleriana HOM05D000026 ORTHO05D000094 1.6e-08 63.2 76 53.9
Aa31LG4G15690 Aethionema arabicum HOM05D000026 ORTHO05D000094 2.8e-08 62.4 76 51.3
BcaB05g22463 Brassica carinata HOM05D000026 ORTHO05D000094 1.8e-07 59.7 76 51.3
BcaB08g35200 Brassica carinata HOM05D000026 ORTHO05D000094 4.0e-07 58.5 52 57.7
THA.LOC104799428 Tarenaya hassleriana HOM05D000026 ORTHO05D000094 3.4e-06 55.5 76 48.7


User provided reference genes

Program Settings