Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14048 Brassica carinata HOM05D007244 ORTHO05D000411 2.8e-138 495.4 265 100.0
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-60 236.9 145 87.6
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 5.7e-14 82.4 134 44.8
C04p72950 Brassica napus HOM05D007244 ORTHO05D011635 1.7e-13 80.9 94 55.3
BraA06t27694Z Brassica rapa HOM05D007244 ORTHO05D027097 1.4e-12 77.8 116 42.2
C08p13350 Brassica napus HOM05D013597 ORTHO05D017540 3.1e-12 76.6 93 48.4
BraA08t33378Z Brassica rapa HOM05D007244 ORTHO05D011709 5.3e-12 75.9 93 48.4
BcaC06g36660 Brassica carinata HOM05D007244 ORTHO05D039184 6.9e-12 75.5 159 37.7
BolC7t40576H Brassica oleracea HOM05D007244 ORTHO05D039184 6.9e-12 75.5 159 37.7
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 6.9e-12 75.5 129 41.1
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 9.1e-12 75.1 129 41.1
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 1.2e-11 74.7 145 42.1
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 4.5e-11 72.8 93 48.4
BolC9t55947H Brassica oleracea HOM05D002126 ORTHO05D002195 4.5e-11 72.8 175 34.3
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 5.9e-11 72.4 113 43.4
A05p03870 Brassica napus HOM05D007244 ORTHO05D027185 1.0e-10 71.6 84 47.6
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 1.7e-10 70.9 86 51.2
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 1.7e-10 70.9 175 34.3
C04p05140 Brassica napus HOM05D007244 ORTHO05D011635 2.9e-10 70.1 117 43.6
BcaC09g48023 Brassica carinata HOM05D007244 ORTHO05D011635 3.8e-10 69.7 132 42.4
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 5.0e-10 69.3 88 50.0
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 5.0e-10 69.3 88 50.0
BolC7t43259H Brassica oleracea HOM05D007244 ORTHO05D105349 6.5e-10 68.9 128 38.3
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 1.4e-09 67.8 115 41.7
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 1.9e-09 67.4 103 38.8
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.5e-09 67.0 91 46.2
C06p49860 Brassica napus HOM05D007244 ORTHO05D011635 2.5e-09 67.0 96 47.9
BolC6t35250H Brassica oleracea HOM05D007244 ORTHO05D015497 2.5e-09 67.0 174 34.5
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.5e-09 67.0 91 46.2
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 7.2e-09 65.5 90 43.3
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 7.2e-09 65.5 110 41.8
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 1.6e-08 64.3 133 38.3
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 1.6e-08 64.3 86 46.5
BolC6t35262H Brassica oleracea HOM05D007244 ORTHO05D027097 1.6e-08 64.3 105 42.9
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 1.6e-08 64.3 133 38.3
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 2.1e-08 63.9 90 42.2
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 2.7e-08 63.5 135 38.5
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 2.7e-08 63.5 135 38.5
C04p39440 Brassica napus HOM05D007244 ORTHO05D011635 2.7e-08 63.5 135 38.5
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-08 63.5 112 42.0
BolC7t40578H Brassica oleracea HOM05D007244 ORTHO05D028076 4.7e-08 62.8 62 50.0
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 7.9e-08 62.0 150 36.0
BcaB05g21481 Brassica carinata HOM05D000048 ORTHO05D000436 1.0e-07 61.6 119 37.8
C04p39410 Brassica napus HOM05D007244 ORTHO05D011635 1.0e-07 61.6 135 37.0
BcaC09g48969 Brassica carinata HOM05D007244 ORTHO05D011635 1.4e-07 61.2 72 52.8
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 1.4e-07 61.2 140 37.9
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 1.8e-07 60.8 172 32.6
BolC1t04930H Brassica oleracea HOM05D007244 ORTHO05D024067 1.8e-07 60.8 90 45.6
BcaB07g33891 Brassica carinata HOM05D007244 ORTHO05D011635 3.0e-07 60.1 93 44.1
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 3.0e-07 60.1 133 37.6
BcaC07g41124 Brassica carinata HOM05D000249 ORTHO05D000206 3.9e-07 59.7 88 38.6
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 5.1e-07 59.3 125 37.6
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 6.7e-07 58.9 92 39.1
BraA09t37805Z Brassica rapa HOM05D007244 ORTHO05D011635 6.7e-07 58.9 82 43.9
C02p37770 Brassica napus HOM05D007244 ORTHO05D015497 8.8e-07 58.5 122 37.7
BolC8t48551H Brassica oleracea HOM05D007244 ORTHO05D011635 8.8e-07 58.5 182 32.4
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 1.1e-06 58.2 115 39.1
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 1.1e-06 58.2 81 46.9
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 1.1e-06 58.2 207 27.1
BcaC01g04059 Brassica carinata HOM05D007244 ORTHO05D024067 1.5e-06 57.8 73 50.7
A02p36210 Brassica napus HOM05D007244 ORTHO05D042440 1.5e-06 57.8 126 38.9
BcaB07g33461 Brassica carinata HOM05D007244 ORTHO05D032887 2.0e-06 57.4 92 42.4
BcaC03g17567 Brassica carinata HOM05D009169 ORTHO05D011621 2.0e-06 57.4 69 53.6
A04p29850 Brassica napus HOM05D007244 ORTHO05D028076 2.0e-06 57.4 115 38.3
BraA04t18445Z Brassica rapa HOM05D007244 ORTHO05D028076 2.0e-06 57.4 115 38.3
BolC5t33793H Brassica oleracea HOM05D007244 ORTHO05D032887 2.6e-06 57.0 59 47.5
BcaB03g16499 Brassica carinata HOM05D013597 ORTHO05D011635 3.3e-06 56.6 89 42.7
BcaB06g28278 Brassica carinata HOM05D007244 ORTHO05D039573 3.3e-06 56.6 132 34.8
BcaC01g01541 Brassica carinata HOM05D000081 ORTHO05D014497 3.3e-06 56.6 73 49.3
BcaC05g29073 Brassica carinata HOM05D007244 ORTHO05D011635 3.3e-06 56.6 123 36.6
BolC8t51261H Brassica oleracea HOM05D013597 ORTHO05D017540 3.3e-06 56.6 77 48.1
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 4.4e-06 56.2 142 30.3
BraA06t24270Z Brassica rapa HOM05D007244 ORTHO05D011635 4.4e-06 56.2 87 41.4
A05p43470 Brassica napus HOM05D007244 ORTHO05D033750 7.4e-06 55.5 61 54.1
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 7.4e-06 55.5 91 38.5
BraA07t31383Z Brassica rapa HOM05D007244 ORTHO05D033750 7.4e-06 55.5 61 54.1
BcaC03g17553 Brassica carinata HOM05D000055 ORTHO05D093663 9.7e-06 55.1 75 46.7
BcaC07g39785 Brassica carinata HOM05D007244 ORTHO05D011635 9.7e-06 55.1 72 44.4
BolC5t29837H Brassica oleracea HOM05D007244 ORTHO05D021589 9.7e-06 55.1 72 50.0
BolC7t45144H Brassica oleracea HOM05D007244 ORTHO05D042440 9.7e-06 55.1 123 39.0
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 9.7e-06 55.1 87 40.2


User provided reference genes

Program Settings