Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 8.6e-143 510.4 270 100.0
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 7.1e-129 464.2 296 85.8
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 1.7e-127 459.5 296 85.5
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 1.7e-127 459.5 296 84.8
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 1.7e-127 459.5 296 84.8
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 5.1e-127 458.0 296 84.8
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 3.3e-126 455.3 296 84.8
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 2.8e-125 452.2 296 83.8
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 1.7e-122 443.0 296 83.1
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 4.9e-114 414.8 300 79.0
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 1.2e-112 410.2 269 84.0
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 3.0e-111 405.6 266 85.0
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 6.6e-111 404.4 266 85.0
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 6.6e-111 404.4 266 84.6
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 8.7e-111 404.1 268 83.6
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 3.3e-110 402.1 266 84.2
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 4.3e-110 401.7 268 82.8
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 4.3e-110 401.7 268 82.8
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 4.3e-110 401.7 266 84.2
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 9.6e-110 400.6 292 78.1
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 3.0e-103 379.0 252 84.1
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 4.8e-101 371.7 232 83.6
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 6.5e-90 334.7 178 99.4
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 8.7e-87 324.3 310 62.9
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 1.9e-86 323.2 212 80.7
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 9.4e-81 304.3 178 92.1
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 1.4e-76 290.4 325 57.8
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 3.3e-70 269.2 149 95.3
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 3.3e-70 269.2 149 95.3
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 2.2e-69 266.5 319 54.9
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 7.0e-68 261.5 151 94.0
BcaC03g14025 Brassica carinata HOM05D007865 ORTHO05D010123 1.0e-39 167.9 94 92.6
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 2.5e-33 146.7 179 53.1
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 4.3e-33 146.0 237 43.9
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 6.2e-32 142.1 176 49.4
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 5.2e-31 139.0 157 51.0
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.2e-31 139.0 157 51.0
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 2.0e-30 137.1 176 48.3
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 4.4e-30 136.0 176 48.3
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 2.2e-29 133.7 179 46.9
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 2.9e-29 133.3 137 54.7
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 3.7e-29 132.9 176 46.6
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 3.7e-29 132.9 176 46.6
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-28 131.3 115 60.0
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.9e-28 130.6 182 45.1
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.6e-27 127.5 160 50.0
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 7.8e-27 125.2 218 42.2
BolC2t07398H Brassica oleracea HOM05D007865 ORTHO05D010123 1.9e-25 120.6 98 76.5
CARHR273100 Cardamine hirsuta HOM05D007865 ORTHO05D010123 3.3e-25 119.8 185 45.9
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 7.3e-25 118.6 121 52.9
BcaB05g22499 Brassica carinata HOM05D007865 ORTHO05D010123 3.1e-23 113.2 82 75.6
Carub.0008s1968 Capsella rubella HOM05D007865 ORTHO05D010123 5.8e-22 109.0 136 45.6
Carub.0008s1992 Capsella rubella HOM05D007865 ORTHO05D010123 5.8e-22 109.0 136 45.6
BolC9t57975H Brassica oleracea HOM05D007865 ORTHO05D010123 3.7e-21 106.3 176 42.0
BcaB03g13835 Brassica carinata HOM05D007865 ORTHO05D010123 1.4e-20 104.4 98 61.2
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.4e-20 104.4 120 53.3
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 3.9e-18 96.3 117 49.6
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 6.6e-18 95.5 153 39.2
BraA10t43701Z Brassica rapa HOM05D007865 ORTHO05D010123 4.3e-17 92.8 174 40.2
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 5.2e-15 85.9 56 71.4
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 7.6e-14 82.0 86 51.2
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 1.7e-13 80.9 70 55.7
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 6.4e-13 79.0 47 78.7
Carub.0006s1626 Capsella rubella HOM05D007865 ORTHO05D010123 1.4e-12 77.8 116 42.2
Thhalv10009374m.g Eutrema salsugineum HOM05D009272 ORTHO05D010513 2.1e-11 73.9 112 39.3
THA.LOC104813384 Tarenaya hassleriana HOM05D007865 ORTHO05D010123 7.8e-11 72.0 131 32.8
BcaB05g22500 Brassica carinata HOM05D007865 ORTHO05D010123 1.9e-09 67.4 74 52.7
Carub.0001s0263 Capsella rubella HOM05D007865 ORTHO05D010513 2.5e-09 67.0 157 31.2
BcaB02g07852 Brassica carinata HOM05D009350 ORTHO05D010513 5.6e-09 65.9 146 30.1
C05p01970 Brassica napus HOM05D009272 ORTHO05D015471 9.6e-09 65.1 105 36.2
C05p02270 Brassica napus HOM05D009272 ORTHO05D015471 9.6e-09 65.1 105 36.2
CARHR249930 Cardamine hirsuta HOM05D009056 ORTHO05D011508 1.6e-08 64.3 131 33.6
CARHR289550 Cardamine hirsuta HOM05D009350 ORTHO05D010513 2.8e-08 63.5 215 31.2
AL6G29200 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 3.6e-08 63.2 145 35.2
BcaC05g24525 Brassica carinata HOM05D009272 ORTHO05D015471 4.7e-08 62.8 105 35.2
BolC5t28976H Brassica oleracea HOM05D009272 ORTHO05D015471 4.7e-08 62.8 105 35.2
BolC5t29005H Brassica oleracea HOM05D009272 ORTHO05D015471 4.7e-08 62.8 99 37.4
BolC2t07399H Brassica oleracea HOM05D007865 ORTHO05D010123 6.2e-08 62.4 69 55.1
Thhalv10017733m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 6.2e-08 62.4 94 40.4
A10p02020 Brassica napus HOM05D009272 ORTHO05D015471 1.1e-07 61.6 105 35.2
A10p02460 Brassica napus HOM05D009272 ORTHO05D015471 1.1e-07 61.6 99 37.4
C06p16700 Brassica napus HOM05D009350 ORTHO05D010513 1.1e-07 61.6 143 30.1
BolC6t36869H Brassica oleracea HOM05D009350 ORTHO05D010513 1.1e-07 61.6 143 30.1
BraA10t42475Z Brassica rapa HOM05D009272 ORTHO05D015471 1.1e-07 61.6 105 35.2
BcaC02g12724 Brassica carinata HOM05D009272 ORTHO05D010513 1.8e-07 60.8 100 36.0
A05p16790 Brassica napus HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
A05p16800 Brassica napus HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
A05p16820 Brassica napus HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
A05p16860 Brassica napus HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
A05p16870 Brassica napus HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
C04p02040 Brassica napus HOM05D009272 ORTHO05D010513 1.8e-07 60.8 100 36.0
C06p16850 Brassica napus HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
BolC4t21854H Brassica oleracea HOM05D009272 ORTHO05D010513 1.8e-07 60.8 100 36.0
BolC6t36881H Brassica oleracea HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
BraA05t20583Z Brassica rapa HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
BraA05t20584Z Brassica rapa HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
BraA05t20585Z Brassica rapa HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
BraA05t20590Z Brassica rapa HOM05D009350 ORTHO05D010513 1.8e-07 60.8 143 30.1
BcaC08g44261 Brassica carinata HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BcaC08g44264 Brassica carinata HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BcaC08g44265 Brassica carinata HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BcaC08g44266 Brassica carinata HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BcaC08g44267 Brassica carinata HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
C06p16770 Brassica napus HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
C06p16790 Brassica napus HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
C06p16820 Brassica napus HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BolC6t36876H Brassica oleracea HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BolC6t36877H Brassica oleracea HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
BolC6t36880H Brassica oleracea HOM05D009350 ORTHO05D010513 2.4e-07 60.5 143 30.1
Thhalv10017577m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 3.1e-07 60.1 174 28.7
BcaB02g06921 Brassica carinata HOM05D009272 ORTHO05D015471 5.2e-07 59.3 128 32.0
BcaB02g06922 Brassica carinata HOM05D009272 ORTHO05D015471 5.2e-07 59.3 128 32.0
BcaB02g06923 Brassica carinata HOM05D009272 ORTHO05D010123 5.2e-07 59.3 128 32.0
BcaB02g06925 Brassica carinata HOM05D009272 ORTHO05D015471 5.2e-07 59.3 128 32.0
C04p02100 Brassica napus HOM05D009272 ORTHO05D010513 5.2e-07 59.3 100 35.0
BolC4t21858H Brassica oleracea HOM05D009272 ORTHO05D010513 5.2e-07 59.3 100 35.0
Thhalv10017056m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 5.2e-07 59.3 189 30.2
AT1G03490 Arabidopsis thaliana HOM05D009272 ORTHO05D010513 1.2e-06 58.2 90 37.8
Sp6g01800 Schrenkiella parvula HOM05D009056 ORTHO05D011508 1.2e-06 58.2 106 34.0
BcaB02g06924 Brassica carinata HOM05D009272 ORTHO05D010513 1.5e-06 57.8 95 35.8
Thhalv10029188m.g Eutrema salsugineum HOM05D009056 ORTHO05D011508 2.0e-06 57.4 114 32.5
THA.LOC104818129 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 2.0e-06 57.4 103 31.1
THA.LOC104806001 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 2.6e-06 57.0 103 31.1
THA.LOC104806002 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 2.6e-06 57.0 103 31.1
CiPaw.01G116900 Carya illinoinensis HOM05D007865 ORTHO05D011589 3.4e-06 56.6 119 34.5
Carub.0006s3546 Capsella rubella HOM05D009056 ORTHO05D011508 4.4e-06 56.2 103 35.9
AL1G12990 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 5.8e-06 55.8 99 34.3
AL1G13550 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 5.8e-06 55.8 99 34.3
Thhalv10015280m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 7.6e-06 55.5 118 38.1
Thhalv10017700m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.6e-06 55.5 205 28.3
BcaB01g03533 Brassica carinata HOM05D009272 ORTHO05D010513 9.9e-06 55.1 117 29.1
BcaC02g12720 Brassica carinata HOM05D009272 ORTHO05D010513 9.9e-06 55.1 97 33.0


User provided reference genes

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