Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 8.6e-84 313.5 150 100.0
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 4.3e-83 311.2 150 98.7
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 9.5e-83 310.1 150 98.0
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 1.8e-81 305.8 150 97.3
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 1.8e-81 305.8 150 97.3
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 2.2e-79 298.9 150 94.7
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 2.4e-78 295.4 150 94.0
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 3.5e-77 291.6 150 92.0
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 6.6e-76 287.3 150 91.3
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 4.7e-74 281.2 151 89.4
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 1.8e-73 279.3 151 88.7
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 6.8e-73 277.3 151 90.1
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 7.0e-70 267.3 151 88.1
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 5.2e-65 251.1 151 80.1
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 1.8e-41 172.9 140 61.4
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 6.4e-31 137.9 142 47.9
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.1e-30 137.1 141 48.2
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.4e-30 136.7 141 48.2
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 2.4e-30 136.0 138 45.7
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.4e-30 136.0 141 48.2
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.4e-30 136.0 141 46.1
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 2.4e-30 136.0 141 45.4
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 4.2e-30 135.2 148 45.3
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 4.2e-30 135.2 142 45.1
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 1.2e-29 133.7 146 47.9
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 1.6e-29 133.3 140 47.1
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.6e-29 133.3 137 45.3
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.5e-29 132.1 132 47.0
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 4.6e-29 131.7 145 42.1
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.3e-28 130.2 143 46.2
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 3.0e-28 129.0 139 44.6
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 5.1e-28 128.3 128 46.9
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 6.7e-28 127.9 135 43.7
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.1e-27 127.1 128 46.9
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 1.5e-27 126.7 141 46.1
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 1.9e-27 126.3 142 44.4
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.9e-27 126.3 141 46.1
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 2.5e-27 125.9 139 43.9
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 3.3e-27 125.6 135 43.0
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.3e-26 123.6 139 41.7
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.6e-26 123.2 139 45.3
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 2.1e-26 122.9 141 46.1
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 3.7e-26 122.1 139 38.8
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 3.7e-26 122.1 136 41.9
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 1.1e-25 120.6 140 42.9
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 5.3e-25 118.2 139 41.0
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 6.9e-25 117.9 141 44.0
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 9.0e-25 117.5 143 43.4
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 9.0e-25 117.5 124 44.4
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 1.5e-24 116.7 125 45.6
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.0e-24 116.3 125 45.6
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.6e-24 115.9 125 45.6
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 2.6e-24 115.9 138 40.6
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 2.6e-24 115.9 124 43.5
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.4e-24 115.5 131 39.7
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.4e-24 115.5 131 39.7
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.3e-23 113.6 138 39.9
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 2.2e-23 112.8 132 43.2
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 6.5e-23 111.3 127 40.9
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 1.4e-22 110.2 126 42.1
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 2.5e-22 109.4 126 42.9
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 4.2e-22 108.6 142 38.0
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.1e-21 106.3 100 49.0
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 2.1e-21 106.3 134 40.3
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 3.5e-21 105.5 100 49.0
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 1.6e-18 96.7 122 37.7
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.1e-17 94.0 113 43.4
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 5.3e-17 91.7 133 36.1
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.4e-14 83.6 130 36.9
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 7.2e-14 81.3 105 40.0


User provided reference genes

Program Settings