Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 1.0e-263 912.9 468 100.0
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 1.0e-263 912.9 468 100.0
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.9e-262 908.7 468 99.4
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 2.4e-249 865.1 469 95.3
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 2.4e-249 865.1 469 95.3
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 3.6e-245 851.3 470 93.8
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 2.4e-233 812.0 471 89.8
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 2.5e-230 802.0 470 87.9
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 2.7e-216 755.4 469 84.2
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 4.2e-214 748.0 468 83.8
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 6.8e-212 740.7 470 82.1
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 3.8e-207 724.9 470 81.3
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.1e-196 690.3 469 75.9
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 6.0e-176 621.3 468 67.7
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 8.1e-165 584.3 468 63.7
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.1e-164 583.9 479 64.3
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 1.5e-163 580.1 471 64.5
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 4.5e-163 578.6 452 65.7
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 2.2e-162 576.2 413 69.2
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.1e-161 573.9 469 65.9
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.4e-161 573.5 472 64.8
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 2.4e-161 572.8 431 66.8
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 3.2e-161 572.4 411 69.6
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 4.2e-161 572.0 469 65.7
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.5e-160 568.9 427 67.0
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 4.6e-160 568.5 409 69.2
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 4.6e-160 568.5 390 71.8
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 6.0e-160 568.2 449 64.6
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 6.0e-160 568.2 390 71.5
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 1.3e-159 567.0 449 64.8
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 1.3e-159 567.0 455 65.3
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 1.8e-159 566.6 390 71.3
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 3.9e-159 565.5 454 63.2
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 6.7e-159 564.7 475 62.7
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 8.7e-159 564.3 473 62.8
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 1.9e-158 563.1 475 63.8
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 5.6e-158 561.6 413 67.3
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 5.6e-158 561.6 441 65.3
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 5.6e-158 561.6 459 63.6
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 7.4e-158 561.2 472 64.0
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 9.6e-158 560.8 468 63.2
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 1.6e-157 560.1 446 63.5
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.6e-157 560.1 470 63.8
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.8e-157 559.3 460 63.3
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.7e-157 558.9 460 63.3
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 3.7e-157 558.9 476 62.8
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 6.2e-157 558.1 459 63.8
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 6.2e-157 558.1 421 65.6
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 1.1e-156 557.4 470 63.2
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 1.1e-156 557.4 441 64.4
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 1.8e-156 556.6 467 63.8
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 1.8e-156 556.6 399 68.9
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 2.4e-156 556.2 457 64.1
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.4e-156 556.2 441 64.4
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 5.3e-156 555.1 444 63.5
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 5.3e-156 555.1 469 62.9
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 6.9e-156 554.7 464 62.7
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 1.2e-155 553.9 385 71.9
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 2.0e-155 553.1 400 67.5
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 2.0e-155 553.1 475 60.4
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 2.6e-155 552.7 474 62.9
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 5.8e-155 551.6 378 71.4
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 7.6e-155 551.2 466 62.9
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 2.2e-154 549.7 469 61.8
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 2.9e-154 549.3 417 66.2
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 1.1e-153 547.4 455 63.3
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 1.9e-153 546.6 366 71.0
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 2.5e-153 546.2 472 61.4
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 3.2e-153 545.8 404 67.3
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 7.1e-153 544.7 399 67.4
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 9.3e-153 544.3 470 60.9
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.7e-152 542.7 461 61.8
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 2.7e-152 542.7 399 67.4
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 1.0e-151 540.8 383 69.2
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 1.0e-151 540.8 442 62.7
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.0e-151 540.8 464 61.4
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 1.0e-151 540.8 444 64.0
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.3e-151 540.4 378 70.1
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 2.3e-151 539.7 464 61.4
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 2.5e-150 536.2 419 64.4
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 3.3e-150 535.8 408 66.7
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 1.6e-149 533.5 391 68.3
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 8.2e-149 531.2 395 67.3
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 3.1e-148 529.3 460 62.0
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 3.1e-148 529.3 437 62.7
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 3.4e-147 525.8 412 63.8
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.0e-146 524.2 416 64.7
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 1.3e-146 523.9 460 60.2
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.2e-146 523.1 409 65.0
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 4.9e-146 521.9 455 61.1
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.9e-145 520.0 463 59.4
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 7.1e-145 518.1 451 60.8
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 2.3e-143 513.1 391 65.2
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 6.7e-143 511.5 464 59.7
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 3.3e-142 509.2 451 60.3
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 1.6e-136 490.3 389 62.5
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 6.1e-136 488.4 461 59.0
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 4.8e-133 478.8 385 61.8
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 1.9e-129 466.8 442 55.7
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.4e-124 450.7 346 65.6
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 4.5e-123 445.7 316 69.0
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.2e-121 439.5 392 61.5
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 2.0e-118 430.3 465 49.5
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 1.0e-106 391.3 359 57.1
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 1.4e-103 380.9 388 52.3
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.3e-103 380.2 382 52.4
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 4.9e-101 372.5 388 52.1
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 2.7e-99 366.7 403 47.6
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.3e-98 363.6 275 66.2
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 1.0e-95 354.8 387 50.6
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.0e-95 354.8 378 47.9
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 4.3e-81 306.2 397 42.3
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.6e-80 304.3 389 46.3
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 8.1e-64 248.8 339 39.5
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 6.2e-48 196.1 138 68.1
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.9e-37 160.6 113 69.0
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 3.8e-37 160.2 254 40.2
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 1.5e-33 148.3 100 67.0
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 9.7e-25 119.0 129 52.7
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.6e-24 118.2 258 32.2
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.8e-24 117.5 129 52.7
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 6.9e-23 112.8 352 28.7
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 5.9e-22 109.8 72 73.6
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 5.9e-22 109.8 352 28.1
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 5.5e-20 103.2 83 65.1
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 9.4e-20 102.4 81 61.7
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 1.1e-15 89.0 116 54.3
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.9e-15 86.3 146 44.5
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.2e-12 77.4 72 56.9
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 4.7e-11 73.6 53 64.2
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.0e-09 68.2 137 40.1


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