Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13422 Brassica carinata HOM05D009607 ORTHO05D009849 9.1e-60 233.4 121 100.0
C02p07580 Brassica napus HOM05D009607 ORTHO05D009849 9.1e-60 233.4 121 100.0
BolC2t06691H Brassica oleracea HOM05D009607 ORTHO05D009849 9.1e-60 233.4 121 100.0
A02p02940 Brassica napus HOM05D009607 ORTHO05D009849 1.2e-59 233.0 121 99.2
BraA02t05266Z Brassica rapa HOM05D009607 ORTHO05D009849 5.9e-59 230.7 121 98.3
BcaNung03324 Brassica carinata HOM05D009607 ORTHO05D009849 6.5e-50 200.7 120 90.8
Sp6g28880 Schrenkiella parvula HOM05D009607 ORTHO05D009849 2.4e-44 182.2 117 84.6
BolC3t13298H Brassica oleracea HOM05D009607 ORTHO05D009849 1.2e-43 179.9 119 82.4
BraA03t10024Z Brassica rapa HOM05D009607 ORTHO05D009849 1.4e-39 166.4 110 81.8
BcaB08g36918 Brassica carinata HOM05D009607 ORTHO05D009849 1.8e-39 166.0 119 78.2
BcaC04g18976 Brassica carinata HOM05D009607 ORTHO05D009849 1.8e-39 166.0 119 78.2
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 1.2e-38 163.3 110 80.9
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 2.0e-38 162.5 117 76.1
CARHR198120 Cardamine hirsuta HOM05D009607 ORTHO05D009849 7.5e-38 160.6 115 75.7
A10p23660 Brassica napus HOM05D009607 ORTHO05D009849 4.9e-37 157.9 119 73.1
BraA10t44430Z Brassica rapa HOM05D009607 ORTHO05D009849 4.9e-37 157.9 119 73.1
C09p61950 Brassica napus HOM05D009607 ORTHO05D009849 1.8e-36 156.0 119 73.1
BcaC04g18975 Brassica carinata HOM05D009607 ORTHO05D009849 5.4e-36 154.5 119 72.3
BolC9t59034H Brassica oleracea HOM05D009607 ORTHO05D009849 5.4e-36 154.5 119 72.3
AT5G15190 Arabidopsis thaliana HOM05D009607 ORTHO05D009849 9.2e-36 153.7 120 71.7
AL6G26040 Arabidopsis lyrata HOM05D009607 ORTHO05D009849 1.2e-35 153.3 112 75.9
BcaB01g05071 Brassica carinata HOM05D009607 ORTHO05D009849 2.0e-35 152.5 119 75.6
Thhalv10016066m.g Eutrema salsugineum HOM05D009607 ORTHO05D009849 2.9e-34 148.7 119 72.3
THA.LOC104821033 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 9.8e-30 133.7 127 62.2
THA.LOC104822523 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 7.0e-28 127.5 126 59.5
Carub.0006s1337 Capsella rubella HOM05D009607 ORTHO05D009849 1.6e-27 126.3 126 66.7
Aa31LG11G14370 Aethionema arabicum HOM05D009607 ORTHO05D009849 5.0e-26 121.3 119 62.2
BcaB01g05073 Brassica carinata HOM05D009607 ORTHO05D009849 6.8e-15 84.3 62 75.8
BcaB01g05070 Brassica carinata HOM05D001645 ORTHO05D001749 1.3e-10 70.1 79 59.5
Prupe.3G269200 Prunus persica HOM05D008650 ORTHO05D009849 3.3e-09 65.5 97 45.4
Cpa.g.sc14.11 Carica papaya HOM05D008650 ORTHO05D009849 4.3e-09 65.1 131 42.0
Manes.17G025188 Manihot esculenta HOM05D008650 ORTHO05D009849 4.0e-07 58.5 109 39.4
CANSAT64G2373 Cannabis sativa HOM05D008650 ORTHO05D009849 8.9e-07 57.4 90 41.1
Thecc.04G079600 Theobroma cacao HOM05D015048 ORTHO05D009849 1.5e-06 56.6 111 38.7
COL.COLO4_04788 Corchorus olitorius HOM05D015048 ORTHO05D009849 2.0e-06 56.2 114 39.5
Atru.chr8.210 Acer truncatum HOM05D009607 ORTHO05D009849 3.4e-06 55.5 99 36.4
Eucgr.I01937 Eucalyptus grandis HOM05D008650 ORTHO05D009849 7.6e-06 54.3 119 39.5
PGR142G1264 Punica granatum HOM05D009607 ORTHO05D009849 9.9e-06 53.9 117 36.8


User provided reference genes

Program Settings