Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 3.6e-271 937.6 447 100.0
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 5.2e-177 624.8 555 63.1
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 1.1e-174 617.1 528 64.6
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-165 587.0 363 81.0
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 6.8e-161 571.2 527 61.5
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-149 532.3 258 98.8
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 4.7e-146 521.9 534 56.4
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 3.7e-143 512.3 517 58.4
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 3.0e-140 502.7 455 61.5
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-132 477.2 458 59.8
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 2.8e-130 469.5 490 54.7
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.8e-129 466.8 415 62.9
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.8e-129 466.8 415 62.9
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-128 463.8 412 62.6
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-128 463.4 431 61.3
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 7.6e-128 461.5 473 56.9
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 2.2e-127 459.9 424 60.8
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 5.4e-126 455.3 451 59.0
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-124 450.7 411 61.1
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-120 436.4 427 58.5
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 4.5e-120 435.6 418 60.5
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 7.4e-115 418.3 301 74.1
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 3.7e-106 389.4 412 55.8
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 2.2e-103 380.2 410 54.6
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 8.7e-100 368.2 384 56.2
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 5.0e-95 352.4 171 97.7
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 7.2e-94 348.6 375 55.7
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 9.4e-94 348.2 296 64.5
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-93 347.8 373 55.8
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-93 347.1 378 55.6
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 3.7e-82 309.7 252 65.9
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-62 245.0 397 42.1
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 2.3e-60 237.3 399 40.6
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 3.7e-58 229.9 377 40.8
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-57 228.0 390 39.7
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 1.4e-57 228.0 407 39.6
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 9.1e-57 225.3 388 40.2
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.7e-56 223.8 402 40.3
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.7e-56 223.8 402 40.3
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 3.8e-55 219.9 215 58.1
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 1.8e-52 211.1 403 37.7
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-49 201.4 387 39.5
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.8e-49 201.1 370 40.0
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 1.2e-48 198.4 394 37.6
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 3.5e-48 196.8 385 38.7
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 3.5e-48 196.8 384 38.5
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 5.9e-48 196.1 151 70.2
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 2.9e-47 193.7 384 37.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.9e-47 193.7 398 36.7
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 3.9e-47 193.4 391 37.1
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 4.3e-46 189.9 369 37.9
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 3.6e-45 186.8 257 44.7
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-41 174.5 358 36.6
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 7.0e-41 172.6 396 38.1
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 2.7e-40 170.6 160 57.5
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 4.6e-40 169.9 173 56.1
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 4.3e-38 163.3 78 97.4
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-35 155.2 264 44.7
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 7.3e-30 136.0 178 43.8
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-29 135.2 183 45.4
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 6.2e-29 132.9 330 32.7
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 8.1e-29 132.5 312 33.3
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.1e-28 132.1 169 44.4
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-25 122.1 132 55.3
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.4e-25 121.7 167 41.9
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 1.4e-25 121.7 198 39.4
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 7.1e-25 119.4 351 31.9
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 9.2e-25 119.0 359 30.6
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 2.1e-24 117.9 390 29.7
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 2.7e-24 117.5 176 41.5
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 3.0e-23 114.0 349 31.8
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 3.3e-22 110.5 110 57.3
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 3.6e-21 107.1 173 39.9
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 6.2e-21 106.3 62 83.9
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 8.1e-21 105.9 177 39.0
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 1.4e-20 105.1 180 38.9
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.4e-20 105.1 172 39.0
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 5.2e-20 103.2 110 55.5
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.0e-19 101.3 365 29.3
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-18 98.6 369 29.3
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-17 95.1 135 46.7
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 1.4e-17 95.1 360 26.4
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 4.2e-17 93.6 135 42.2
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-16 91.7 67 67.2
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 6.0e-16 89.7 178 34.8
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 2.3e-15 87.8 271 32.8
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 6.6e-15 86.3 264 32.2
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 7.3e-14 82.8 85 52.9
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-11 75.5 112 42.9
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 3.2e-09 67.4 154 33.1
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 2.1e-08 64.7 72 52.8
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 2.1e-08 64.7 89 46.1
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 4.6e-08 63.5 336 24.4
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 2.3e-07 61.2 34 82.4
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.1e-06 58.9 171 31.0
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 2.5e-06 57.8 62 46.8
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 3.3e-06 57.4 140 34.3
AL7G21380 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 4.3e-06 57.0 150 29.3
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 4.3e-06 57.0 140 34.3
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 4.3e-06 57.0 140 34.3
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 4.3e-06 57.0 184 31.0
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 5.6e-06 56.6 324 25.9
AL5G41570 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 7.3e-06 56.2 140 32.1


User provided reference genes

Program Settings