Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g12985 Brassica carinata HOM05D017478 ORTHO05D021594 2.4e-34 148.3 74 100.0
C02p01490 Brassica napus HOM05D017478 ORTHO05D021594 6.8e-34 146.7 74 98.6
BcaC03g12958 Brassica carinata HOM05D017478 ORTHO05D021594 4.4e-33 144.1 74 97.3
BcaC03g12962 Brassica carinata HOM05D017478 ORTHO05D021594 4.4e-33 144.1 74 97.3
C02p01740 Brassica napus HOM05D017478 ORTHO05D021594 4.4e-33 144.1 74 97.3
C02p01770 Brassica napus HOM05D017478 ORTHO05D021594 4.4e-33 144.1 74 97.3
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-25 118.2 60 96.7
BcaC03g12990 Brassica carinata HOM05D017478 ORTHO05D092415 9.0e-18 93.2 49 87.8
AL6G13250 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 3.8e-16 87.8 74 64.9
AT5G03720 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 2.4e-15 85.1 79 62.0
Sp6g39000 Schrenkiella parvula HOM05D000123 ORTHO05D000064 1.2e-14 82.8 75 62.7
Carub.0006s0264 Capsella rubella HOM05D000123 ORTHO05D000064 4.6e-14 80.9 72 62.5
Thhalv10013758m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 1.8e-13 79.0 74 63.5
A10p32380 Brassica napus HOM05D000123 ORTHO05D000064 1.5e-12 75.9 80 58.8
C09p73200 Brassica napus HOM05D000123 ORTHO05D000064 1.5e-12 75.9 80 58.8
BolC9t60055H Brassica oleracea HOM05D000123 ORTHO05D000064 1.5e-12 75.9 80 58.8
BraA10t45278Z Brassica rapa HOM05D000123 ORTHO05D000064 1.5e-12 75.9 80 58.8
CARHR209580 Cardamine hirsuta HOM05D000123 ORTHO05D000064 4.3e-12 74.3 77 58.4
BcaC06g32079 Brassica carinata HOM05D000123 ORTHO05D000064 4.8e-11 70.9 76 59.2


User provided reference genes

Program Settings