Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-141 506.5 243 100.0
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 1.6e-95 353.2 366 55.5
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 4.8e-84 315.1 335 54.9
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-70 270.8 371 45.8
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 2.1e-63 246.5 371 43.7
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-50 203.0 369 38.8
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.0e-49 201.1 374 36.9
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-49 200.3 374 36.9
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-49 200.3 374 36.9
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 7.2e-48 194.9 371 37.7
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 2.1e-47 193.4 376 35.1
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 6.3e-44 181.8 355 36.6
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-42 177.2 367 35.4
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-42 177.2 356 37.4
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-42 176.8 358 36.6
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-41 174.5 399 34.6
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 3.8e-41 172.6 368 35.6
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-40 170.6 139 66.9
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 2.5e-40 169.9 348 35.3
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 4.2e-40 169.1 366 34.4
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 6.1e-39 165.2 102 83.3
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 4.0e-38 162.5 368 34.8
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 8.8e-38 161.4 368 35.1
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-37 160.2 383 33.9
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 2.0e-37 160.2 358 32.7
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 3.4e-37 159.5 353 34.3
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.7e-34 149.8 382 29.8
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.7e-34 149.8 382 29.8
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 7.7e-34 148.3 146 57.5
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 2.2e-33 146.7 146 57.5
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 4.2e-32 142.5 221 43.0
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-31 140.2 146 55.5
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 1.4e-27 127.5 145 51.0
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 9.1e-27 124.8 102 64.7
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 5.9e-26 122.1 139 50.4
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-25 121.3 298 31.9
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 1.0e-25 121.3 180 42.8
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-25 120.9 146 47.9
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 2.3e-25 120.2 96 61.5
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 2.9e-25 119.8 110 59.1
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 5.0e-25 119.0 146 47.9
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 2.5e-24 116.7 146 47.3
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 4.2e-24 115.9 146 47.3
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-24 115.5 146 46.6
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 1.6e-23 114.0 241 33.2
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 1.0e-22 111.3 200 41.0
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 2.4e-19 100.1 127 45.7
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 5.9e-18 95.5 119 47.1
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 7.8e-18 95.1 119 43.7
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 8.6e-17 91.7 112 44.6
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 1.5e-16 90.9 112 43.8
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-16 90.5 76 60.5
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-15 86.7 170 37.6
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 3.6e-15 86.3 76 59.2
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 8.0e-15 85.1 56 73.2
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 2.3e-14 83.6 113 39.8
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 3.1e-14 83.2 64 62.5
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 4.0e-14 82.8 152 34.9
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 5.2e-14 82.4 107 45.8
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 1.5e-13 80.9 125 39.2
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.5e-13 80.9 131 38.9
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 1.5e-13 80.9 131 38.9
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 2.0e-13 80.5 126 39.7
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 2.0e-13 80.5 130 37.7
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-13 79.7 130 38.5
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 5.8e-13 79.0 76 50.0
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 7.5e-13 78.6 126 38.1
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-12 77.4 305 27.2
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-12 77.4 298 28.2
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 2.4e-11 73.6 132 37.9
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 3.2e-11 73.2 56 62.5
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.2e-10 71.2 115 37.4
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 1.7e-09 67.4 100 40.0
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 2.3e-09 67.0 92 38.0
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-08 64.7 88 43.2
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 3.3e-08 63.2 88 42.0
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 5.6e-08 62.4 107 35.5
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-07 61.2 85 40.0
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-07 60.8 62 53.2
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.6e-07 60.8 85 38.8
BraA02t04806Z Brassica rapa HOM05D007309 ORTHO05D010099 6.8e-06 55.5 37 73.0
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 8.9e-06 55.1 83 33.7


User provided reference genes

Program Settings