Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-260 902.1 452 100.0
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 3.7e-255 884.4 467 95.9
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-224 780.8 400 95.2
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-218 762.7 409 93.9
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-214 748.0 409 92.9
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 6.3e-207 724.2 396 92.9
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 1.6e-205 719.5 434 85.9
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 6.6e-196 687.6 399 89.0
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-190 669.8 399 86.0
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 4.6e-181 638.3 447 74.7
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 1.4e-166 590.1 394 76.4
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 4.3e-155 552.0 396 71.2
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 1.6e-154 550.1 357 82.1
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 1.8e-153 546.6 523 58.5
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 7.6e-144 514.6 552 55.3
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-142 510.8 437 62.2
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.1e-142 510.8 403 66.7
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-142 510.4 401 66.3
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-139 500.7 448 60.3
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-131 473.8 458 59.8
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 1.0e-127 461.1 534 51.9
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 7.2e-126 454.9 524 52.9
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-125 453.8 295 78.0
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-110 403.7 297 68.0
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 3.7e-106 389.4 378 56.9
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 3.1e-105 386.3 374 58.0
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-104 382.9 377 57.6
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 4.1e-97 359.4 253 75.5
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 8.6e-87 325.1 212 75.9
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 3.2e-81 306.6 383 50.4
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 2.4e-73 280.4 258 63.6
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 7.3e-70 268.9 383 45.4
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 2.1e-69 267.3 384 44.3
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 4.7e-69 266.2 385 45.5
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.4e-68 264.6 384 44.8
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 5.2e-68 262.7 384 44.5
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-67 261.2 420 41.9
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 2.0e-67 260.8 423 40.9
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 2.6e-67 260.4 386 43.8
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 5.8e-67 259.2 418 40.9
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 2.2e-66 257.3 375 44.5
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 2.4e-65 253.8 398 41.7
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 3.2e-65 253.4 415 40.2
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 2.7e-64 250.4 431 39.4
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 4.6e-64 249.6 388 42.5
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 4.6e-64 249.6 388 42.5
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-63 248.1 376 43.4
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 9.9e-59 231.9 387 40.3
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 1.3e-55 221.5 383 39.9
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 3.4e-51 206.8 237 49.8
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 9.6e-46 188.7 394 38.3
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-44 185.3 148 64.2
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-43 180.3 127 71.7
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 2.1e-40 171.0 368 35.6
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 3.9e-39 166.8 151 59.6
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 8.7e-39 165.6 267 42.7
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 3.3e-38 163.7 289 38.1
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 1.1e-36 158.7 171 54.4
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 5.8e-35 152.9 199 45.7
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-32 145.2 179 43.6
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 6.0e-32 142.9 374 32.1
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-31 141.7 131 63.4
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 2.5e-30 137.5 166 53.0
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 2.4e-28 131.0 356 33.4
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 3.1e-28 130.6 202 40.6
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 5.3e-28 129.8 444 30.2
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 9.0e-28 129.0 398 32.9
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 2.6e-27 127.5 415 29.9
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 4.2e-25 120.2 83 71.1
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 7.1e-25 119.4 202 38.6
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 1.8e-23 114.8 395 27.3
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 3.0e-23 114.0 179 38.0
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 5.1e-23 113.2 179 37.4
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 1.1e-22 112.1 101 60.4
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.5e-22 110.9 360 31.1
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 5.7e-22 109.8 195 34.4
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.8e-21 107.5 373 27.3
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 4.8e-21 106.7 93 64.5
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 2.4e-20 104.4 109 53.2
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 9.0e-20 102.4 259 33.2
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-19 102.1 268 34.7
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 4.5e-19 100.1 60 78.3
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 7.7e-19 99.4 192 37.0
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.2e-16 92.0 173 34.7
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-16 91.3 133 42.9
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 3.6e-16 90.5 164 39.0
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 3.3e-14 84.0 141 45.4
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 9.7e-14 82.4 174 33.9
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 9.7e-14 82.4 122 39.3
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.3e-13 82.0 352 27.3
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 6.3e-13 79.7 195 33.8
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 8.2e-13 79.3 76 56.6
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 5.3e-12 76.6 160 33.1
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-11 75.5 64 60.9
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 2.6e-11 74.3 75 53.3
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 3.4e-11 73.9 353 26.1
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 3.4e-11 73.9 353 26.1
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 8.5e-10 69.3 70 51.4
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.1e-09 68.9 62 51.6
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 1.9e-09 68.2 163 35.6
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 1.9e-09 68.2 163 35.6
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 6.1e-08 63.2 134 37.3
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 1.8e-07 61.6 111 36.9
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 6.7e-07 59.7 111 35.1
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 6.7e-07 59.7 111 35.1
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 1.5e-06 58.5 155 29.0
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-06 56.6 28 85.7
C07p13270 Brassica napus HOM05D023794 ORTHO05D028264 5.7e-06 56.6 176 29.0
AUR62002684 Chenopodium quinoa HOM05D001456 ORTHO05D002799 9.7e-06 55.8 167 29.9
AUR62030141 Chenopodium quinoa HOM05D001456 ORTHO05D002799 9.7e-06 55.8 119 30.3


User provided reference genes

Program Settings