Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 9.3e-171 603.6 335 100.0
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 8.7e-153 543.9 307 99.0
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.8e-145 519.6 307 96.4
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 3.3e-144 515.4 307 95.8
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 3.3e-144 515.4 307 95.8
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 5.9e-141 504.6 307 94.5
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 1.3e-140 503.4 303 95.0
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 7.7e-125 451.1 267 92.5
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 7.7e-125 451.1 267 92.5
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 2.7e-122 442.6 279 92.8
BcaB08g34407 Brassica carinata HOM05D010239 ORTHO05D032921 1.0e-105 387.5 234 95.7
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 5.4e-94 348.6 189 95.2
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 2.3e-52 210.3 146 76.7
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 4.3e-51 206.1 145 75.9
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 7.3e-51 205.3 145 75.2
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 1.4e-46 191.0 202 56.9
BcaB01g01520 Brassica carinata HOM05D010239 ORTHO05D090601 7.9e-45 185.3 204 59.8
BolC9t58576H Brassica oleracea HOM05D010239 ORTHO05D106135 9.0e-41 171.8 114 97.4
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 5.8e-40 169.1 146 66.4
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 4.2e-38 162.9 145 64.8
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 7.1e-38 162.2 102 82.4
BcaB01g03011 Brassica carinata HOM05D010239 ORTHO05D095759 1.4e-17 94.7 102 57.8
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 3.1e-17 93.6 133 42.9
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 6.9e-17 92.4 132 47.0
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 9.1e-17 92.0 133 42.9
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 2.2e-15 87.4 99 51.5
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 3.8e-15 86.7 119 47.9
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 5.0e-15 86.3 93 52.7
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 5.0e-15 86.3 99 52.5
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 5.0e-15 86.3 93 52.7
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 5.0e-15 86.3 93 52.7
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 6.5e-15 85.9 99 51.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 2.5e-14 84.0 99 48.5
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 3.2e-14 83.6 99 51.5
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 4.2e-14 83.2 99 48.5
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 5.5e-14 82.8 99 47.5
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 2.7e-13 80.5 106 44.3
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 3.6e-13 80.1 100 45.0
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 6.1e-13 79.3 112 43.8
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 2.3e-12 77.4 121 44.6
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 2.3e-12 77.4 121 44.6
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 3.0e-12 77.0 133 41.4
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 3.9e-12 76.6 133 41.4
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 3.9e-12 76.6 133 41.4
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 6.7e-12 75.9 128 40.6
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.1e-11 75.1 99 44.4
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.5e-11 74.7 145 40.7
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.6e-11 73.9 86 48.8
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 7.4e-11 72.4 86 48.8
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 7.4e-11 72.4 86 48.8
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 7.4e-11 72.4 86 48.8
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 9.7e-11 72.0 99 43.4
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 2.2e-10 70.9 86 47.7
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 8.2e-10 68.9 79 48.1
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 1.1e-09 68.6 78 48.7
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 2.4e-09 67.4 84 45.2
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 3.1e-09 67.0 101 47.5
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 5.3e-09 66.2 74 52.7
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 7.0e-09 65.9 113 41.6
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 9.1e-09 65.5 87 50.6
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.5e-08 64.7 74 50.0
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 3.4e-08 63.5 79 53.2
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 4.5e-08 63.2 110 40.0
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 1.3e-07 61.6 70 58.6
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 5.0e-07 59.7 73 47.9
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 5.0e-07 59.7 68 52.9
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 5.0e-07 59.7 68 52.9
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 6.5e-07 59.3 55 56.4
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 1.9e-06 57.8 76 50.0


User provided reference genes

Program Settings