Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 6.9e-194 680.6 390 100.0
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 1.2e-145 520.4 333 84.1
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 3.5e-145 518.8 334 84.4
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 5.4e-138 495.0 325 82.8
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 9.2e-138 494.2 326 83.1
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 9.5e-135 484.2 334 78.7
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 2.0e-132 476.5 334 78.4
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 5.1e-128 461.8 333 75.1
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.5e-127 460.3 333 74.8
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 9.6e-127 457.6 333 74.5
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 4.7e-126 455.3 333 73.9
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 2.6e-116 422.9 339 69.3
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 9.9e-116 421.0 338 68.3
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 3.8e-115 419.1 339 68.7
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 6.4e-115 418.3 339 68.4
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 1.1e-114 417.5 339 68.4
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 1.1e-114 417.5 339 69.0
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 2.1e-113 413.3 339 67.8
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 6.0e-113 411.8 339 68.1
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.1e-111 407.5 351 65.8
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 7.3e-111 404.8 333 67.6
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.3e-110 404.1 333 66.7
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 2.1e-110 403.3 351 65.8
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 2.1e-110 403.3 341 65.4
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 2.8e-110 402.9 351 65.5
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 2.8e-110 402.9 351 65.5
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 2.2e-107 393.3 341 64.8
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 5.5e-106 388.7 350 64.3
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 1.8e-104 383.6 338 62.1
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 5.1e-104 382.1 338 62.4
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 1.1e-103 380.9 336 63.4
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 3.3e-103 379.4 338 61.8
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 4.3e-103 379.0 338 62.7
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 4.3e-103 379.0 339 62.2
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 9.6e-103 377.9 342 60.8
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 9.6e-103 377.9 338 62.1
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.3e-102 377.5 337 62.9
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 1.6e-102 377.1 339 62.5
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 2.1e-102 376.7 338 61.5
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 3.7e-102 375.9 338 60.9
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.1e-101 374.4 338 61.2
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 1.1e-101 374.4 340 61.8
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 1.4e-101 374.0 338 61.2
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 1.8e-101 373.6 339 62.2
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 2.4e-101 373.2 339 61.9
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 2.4e-101 373.2 339 61.9
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 2.4e-101 373.2 341 59.8
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 2.4e-101 373.2 339 61.1
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 2.4e-101 373.2 333 61.9
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 5.3e-101 372.1 338 59.8
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 5.3e-101 372.1 340 61.8
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 9.0e-101 371.3 338 60.4
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 1.2e-100 370.9 340 61.5
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 1.2e-100 370.9 340 61.5
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 1.2e-100 370.9 334 61.7
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 3.4e-100 369.4 340 60.3
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 3.4e-100 369.4 340 60.3
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 3.4e-100 369.4 337 62.6
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 4.5e-100 369.0 334 61.7
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 7.6e-100 368.2 338 60.4
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 7.6e-100 368.2 342 59.9
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 1.0e-99 367.9 338 60.4
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 1.0e-99 367.9 338 60.1
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.3e-99 367.5 338 61.5
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 4.9e-99 365.5 338 60.4
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 8.4e-99 364.8 340 60.3
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 1.9e-98 363.6 335 59.7
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 5.5e-98 362.1 364 57.1
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 1.2e-97 360.9 339 59.3
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 2.1e-97 360.1 337 59.1
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 2.7e-97 359.8 339 59.6
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 2.7e-97 359.8 342 59.1
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 3.0e-96 356.3 338 59.5
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 2.5e-95 353.2 331 58.3
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 9.6e-95 351.3 339 57.8
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 2.1e-94 350.1 341 56.9
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 3.7e-94 349.4 368 54.6
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 3.7e-94 349.4 340 57.1
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 8.2e-94 348.2 343 56.9
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 4.1e-93 345.9 336 57.1
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 4.1e-93 345.9 343 57.7
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 4.1e-93 345.9 324 59.6
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 6.9e-93 345.1 343 56.0
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 6.9e-93 345.1 340 56.5
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 2.0e-92 343.6 373 55.2
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 5.9e-92 342.0 372 54.0
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 1.3e-91 340.9 332 57.5
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 1.7e-91 340.5 333 56.2
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 2.2e-91 340.1 338 56.8
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 2.9e-91 339.7 341 54.8
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 2.9e-91 339.7 340 56.8
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 3.8e-91 339.3 362 53.6
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 5.0e-91 339.0 340 55.9
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 5.0e-91 339.0 337 56.7
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 5.5e-90 335.5 338 56.2
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 5.5e-90 335.5 342 55.0
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 2.7e-89 333.2 336 55.7
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 1.5e-87 327.4 341 54.3
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 3.7e-86 322.8 366 52.2
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.5e-84 317.4 397 47.9
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 2.6e-84 316.6 342 52.9
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 7.7e-84 315.1 343 51.9
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.7e-83 313.9 339 52.5
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 3.8e-83 312.8 339 54.9
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 2.7e-81 306.6 267 61.4
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 3.0e-80 303.1 338 52.1
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 2.5e-79 300.1 316 54.1
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 4.3e-79 299.3 341 52.2
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 9.7e-79 298.1 331 53.8
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 1.4e-77 294.3 267 59.6
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 1.3e-75 287.7 306 54.2
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 1.7e-75 287.3 343 50.1
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 1.1e-74 284.6 272 57.4
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 1.4e-74 284.3 250 61.6
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 4.2e-74 282.7 257 56.8
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 1.8e-72 277.3 339 50.4
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 3.9e-72 276.2 339 49.9
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 3.3e-71 273.1 358 48.3
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 2.2e-70 270.4 242 58.3
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 2.6e-68 263.5 333 49.8
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 1.0e-67 261.5 352 43.8
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 3.8e-67 259.6 338 48.8
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.5e-66 257.7 339 49.0
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 4.2e-66 256.1 291 49.8
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 7.2e-66 255.4 319 51.1
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 9.4e-66 255.0 335 45.1
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 3.6e-65 253.1 346 45.4
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 3.7e-62 243.0 306 45.4
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 2.4e-61 240.4 295 48.5
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 5.0e-59 232.6 259 55.2
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 8.5e-59 231.9 369 43.4
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 4.7e-57 226.1 340 43.8
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 2.3e-56 223.8 247 53.0
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 4.0e-56 223.0 246 52.8
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 8.8e-56 221.9 330 43.3
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 8.3e-54 215.3 362 38.1
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 1.1e-53 214.9 272 44.9
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 2.4e-53 213.8 247 50.2
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 7.7e-52 208.8 367 40.1
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 1.5e-50 204.5 336 41.1
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 2.7e-49 200.3 222 51.4
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 3.7e-46 189.9 382 36.1
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 1.1e-45 188.3 217 51.2
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 2.0e-39 167.5 266 46.2
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 8.3e-38 162.2 335 34.3
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 1.9e-34 151.0 281 43.1
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 2.6e-31 140.6 129 60.5
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 2.9e-30 137.1 113 63.7
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 4.9e-30 136.3 93 72.0
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 1.7e-22 111.3 352 29.5
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 3.7e-22 110.2 72 69.4
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 1.2e-15 88.6 63 66.7
Psat3g079760 Pisum sativum HOM05D004518 ORTHO05D005434 1.7e-14 84.7 79 62.0
TAR369G0459 Trochodendron aralioides HOM05D004518 ORTHO05D005434 8.4e-14 82.4 100 50.0
FAN02G0789 Fragaria x ananassa HOM05D004518 ORTHO05D011253 7.1e-13 79.3 56 69.6
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 2.5e-10 70.9 373 24.7
MBI19_g45264_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 5.2e-08 63.2 137 35.8
PGSC0003DMG400012448 Solanum tuberosum HOM05D004518 ORTHO05D005434 6.4e-06 56.2 47 59.6


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