Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12668 Brassica carinata HOM05D004435 ORTHO05D005103 3.8e-148 528.1 255 100.0
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 1.8e-121 439.5 214 100.0
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 6.3e-119 431.0 214 98.1
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 1.8e-118 429.5 214 97.2
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 1.2e-117 426.8 214 97.2
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 1.5e-109 399.8 219 90.9
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 2.1e-106 389.4 214 86.4
CARHR141910 Cardamine hirsuta HOM05D004435 ORTHO05D005103 3.9e-105 385.2 214 85.5
Aa31LG1G27960 Aethionema arabicum HOM05D004435 ORTHO05D005103 8.8e-105 384.0 253 74.3
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 2.6e-104 382.5 215 85.6
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 9.1e-102 374.0 214 84.1
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 1.8e-94 349.7 203 83.3
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 3.1e-94 349.0 214 77.6
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 1.1e-75 287.3 236 59.7
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 1.9e-75 286.6 231 61.9
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 8.0e-74 281.2 193 66.8
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.2e-72 277.3 198 64.1
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 7.5e-72 274.6 204 63.7
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 2.2e-71 273.1 240 56.2
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 2.2e-71 273.1 204 63.7
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 1.1e-70 270.8 195 65.6
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 2.4e-70 269.6 223 58.7
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 3.2e-70 269.2 204 62.3
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 1.7e-68 263.5 200 61.5
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 3.9e-68 262.3 201 59.7
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 5.0e-68 261.9 236 55.1
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 5.0e-68 261.9 238 55.0
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 8.6e-68 261.2 212 58.0
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 5.6e-67 258.5 198 62.6
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.6e-67 258.5 198 62.6
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.6e-67 258.5 198 62.6
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 5.6e-67 258.5 204 62.3
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 7.3e-67 258.1 195 63.1
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 1.2e-66 257.3 222 58.6
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 1.6e-66 256.9 195 62.6
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 2.1e-66 256.5 195 62.6
TAR374G0897 Trochodendron aralioides HOM05D004435 ORTHO05D005103 2.1e-66 256.5 204 59.3
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.6e-66 255.8 198 62.1
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.6e-66 255.8 198 62.6
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.0e-65 254.2 198 62.1
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 1.8e-65 253.4 232 55.6
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 4.4e-64 248.8 229 52.4
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 7.5e-64 248.1 232 54.7
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 7.5e-64 248.1 198 59.1
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.3e-63 247.3 193 60.6
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 2.2e-63 246.5 200 59.0
TPR.G20227 Trifolium pratense HOM05D004435 ORTHO05D005103 6.4e-63 245.0 234 54.7
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 1.9e-62 243.4 203 58.6
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 1.2e-61 240.7 232 53.4
Glyma.16G023300 Glycine max HOM05D004435 ORTHO05D005103 2.7e-61 239.6 224 53.1
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 6.0e-61 238.4 236 52.1
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.0e-60 237.7 199 59.8
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 1.7e-60 236.9 222 52.7
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 6.6e-60 235.0 219 54.8
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 8.6e-60 234.6 197 58.4
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 8.6e-60 234.6 202 53.0
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 1.1e-59 234.2 198 53.5
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.1e-59 234.2 204 55.9
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 1.9e-59 233.4 197 57.9
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 3.3e-59 232.6 195 53.3
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 3.3e-59 232.6 224 52.2
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 4.3e-59 232.3 195 53.8
Nitab4.5_0007244g0030 Nicotiana tabacum HOM05D004435 ORTHO05D005103 9.5e-59 231.1 203 51.7
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 4.7e-58 228.8 224 51.8
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 6.2e-58 228.4 211 53.6
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 1.1e-57 227.6 208 55.3
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 4.0e-57 225.7 184 56.0
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 1.2e-56 224.2 201 55.2
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 2.0e-56 223.4 219 55.7
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 2.0e-56 223.4 195 52.3
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 7.5e-56 221.5 197 55.8
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 8.3e-55 218.0 198 55.1
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 3.2e-54 216.1 186 52.7
DCAR_008669 Daucus carota HOM05D004435 ORTHO05D005103 7.8e-53 211.5 189 56.6
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 1.0e-52 211.1 191 51.8
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 3.9e-52 209.1 201 54.7
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 2.5e-51 206.5 288 40.6
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 7.3e-51 204.9 199 49.2
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 9.9e-48 194.5 200 51.0
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 2.2e-47 193.4 210 48.6
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 1.1e-46 191.0 201 49.8
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 4.1e-46 189.1 190 46.3
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 9.2e-46 188.0 188 48.4
HPP92_020188 Vanilla planifolia HOM05D004435 ORTHO05D005103 2.3e-44 183.3 190 47.9
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 6.6e-36 155.2 139 51.8
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 7.6e-32 141.7 193 37.3
FAN10G3206 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.6e-26 124.0 113 55.8
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 1.8e-25 120.6 193 35.8
FAN10G3182 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.9e-25 118.6 113 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2860 Anthoceros agrestis HOM05D004435 ORTHO05D005103 9.0e-25 118.2 203 34.0
Mapoly0001s0466 Marchantia polymorpha HOM05D004435 ORTHO05D005103 9.0e-25 118.2 188 36.7
ATR0605G097 Amborella trichopoda HOM05D004435 ORTHO05D005103 1.5e-24 117.5 200 36.5
Hma1.2p1_0101F.1_g049260 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 1.7e-23 114.0 100 56.0
Hma1.2p1_0101F.1_g049200 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 8.4e-23 111.7 74 63.5
Lj7C498G9 Lonicera japonica HOM05D004435 ORTHO05D005103 2.1e-18 97.1 67 62.7
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 1.8e-17 94.0 60 66.7
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.5e-16 90.9 69 62.3
SEGI_36456 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 1.1e-14 84.7 116 36.2
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 8.2e-10 68.6 256 23.0
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 5.3e-09 65.9 76 43.4
SEGI_19519 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 3.8e-07 59.7 74 35.1


User provided reference genes

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