Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12649 Brassica carinata HOM05D000591 ORTHO05D017187 6.7e-49 197.2 113 100.0
C04p01230 Brassica napus HOM05D000591 ORTHO05D017187 4.3e-27 124.8 77 98.7
BolC4t21778H Brassica oleracea HOM05D000591 ORTHO05D017187 4.3e-27 124.8 77 98.7
Thhalv10001366m.g Eutrema salsugineum HOM05D000591 ORTHO05D000579 1.1e-06 57.0 47 63.8
Sp4g28740 Schrenkiella parvula HOM05D000591 ORTHO05D000579 1.1e-06 57.0 47 63.8
BcaC02g07011 Brassica carinata HOM05D000591 ORTHO05D000579 1.9e-06 56.2 47 59.6
A04p34580 Brassica napus HOM05D000591 ORTHO05D000579 1.9e-06 56.2 47 59.6
C04p72370 Brassica napus HOM05D000591 ORTHO05D000579 1.9e-06 56.2 47 59.6
BolC4t28723H Brassica oleracea HOM05D000591 ORTHO05D000579 1.9e-06 56.2 47 59.6
BraA04t18916Z Brassica rapa HOM05D000591 ORTHO05D000579 1.9e-06 56.2 47 59.6
AL4G46170 Arabidopsis lyrata HOM05D000591 ORTHO05D000579 2.4e-06 55.8 47 61.7
AT2G46700 Arabidopsis thaliana HOM05D000591 ORTHO05D000579 2.4e-06 55.8 47 61.7
Carub.0004s2941 Capsella rubella HOM05D000591 ORTHO05D000579 2.4e-06 55.8 47 61.7
CARHR142050 Cardamine hirsuta HOM05D000591 ORTHO05D000579 2.4e-06 55.8 47 61.7
Atru.chr5.743 Acer truncatum HOM05D000591 ORTHO05D000579 5.4e-06 54.7 47 57.4


User provided reference genes

Program Settings