Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12584 Brassica carinata HOM05D000621 ORTHO05D000421 1.2e-61 239.6 110 100.0
BcaB02g08793 Brassica carinata HOM05D000621 ORTHO05D000421 1.6e-26 122.9 134 49.3
BcaC02g12582 Brassica carinata HOM05D000621 ORTHO05D000421 2.1e-26 122.5 104 59.6
BolC4t21700H Brassica oleracea HOM05D000621 ORTHO05D000421 2.4e-22 109.0 133 47.4
A05p00620 Brassica napus HOM05D004146 ORTHO05D004843 2.9e-20 102.1 124 48.4
Thhalv10001344m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 3.5e-18 95.1 134 42.5
AL4G46780 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 5.1e-17 91.3 66 59.1
AT2G47230 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 6.6e-17 90.9 146 39.0
C04p00670 Brassica napus HOM05D000621 ORTHO05D000421 8.7e-17 90.5 64 64.1
Thhalv10001340m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 8.1e-15 84.0 81 45.7
CARHR025430 Cardamine hirsuta HOM05D000621 ORTHO05D000421 1.5e-13 79.7 136 37.5
Carub.0001s2450 Capsella rubella HOM05D000621 ORTHO05D000421 7.6e-13 77.4 151 35.1
CARHR142620 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.2e-12 75.9 61 55.7
C05p60860 Brassica napus HOM05D000621 ORTHO05D000421 1.4e-11 73.2 87 40.2
BcaB06g29457 Brassica carinata HOM05D000621 ORTHO05D000421 1.9e-11 72.8 63 55.6
BcaC05g30034 Brassica carinata HOM05D000621 ORTHO05D000421 2.4e-11 72.4 126 34.9
CARHR142610 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.4e-11 72.4 160 31.9
BcaB04g21331 Brassica carinata HOM05D000621 ORTHO05D000421 5.4e-11 71.2 117 39.3
Carub.0001s0241 Capsella rubella HOM05D000621 ORTHO05D000421 5.4e-11 71.2 108 38.0
AT1G03300 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 2.7e-10 68.9 89 38.2
BolC1t05627H Brassica oleracea HOM05D000621 ORTHO05D000421 2.7e-10 68.9 113 38.9
BNapus_Darmor_BZH_scaffold_118p00180 Brassica napus HOM05D000621 ORTHO05D000421 3.5e-10 68.6 113 38.9
AL6G35050 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 7.8e-10 67.4 100 38.0
BcaB04g21333 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-09 67.0 116 35.3
BcaC05g30032 Brassica carinata HOM05D000621 ORTHO05D000421 1.0e-09 67.0 118 36.4
A05p41650 Brassica napus HOM05D000621 ORTHO05D000421 1.0e-09 67.0 134 31.3
BraA05t22885Z Brassica rapa HOM05D000621 ORTHO05D000421 1.0e-09 67.0 134 31.3
AL1G12810 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.3e-09 66.6 71 45.1
Sp3g05300 Schrenkiella parvula HOM05D000621 ORTHO05D000421 1.3e-09 66.6 126 36.5
BcaC05g29811 Brassica carinata HOM05D000621 ORTHO05D000421 1.7e-09 66.2 121 34.7
BcaC05g29812 Brassica carinata HOM05D000621 ORTHO05D000421 2.3e-09 65.9 83 38.6
BolC5t34743H Brassica oleracea HOM05D000621 ORTHO05D000421 2.3e-09 65.9 83 38.6
BcaB06g26696 Brassica carinata HOM05D006890 ORTHO05D000421 1.5e-08 63.2 54 50.0
BcaB06g26669 Brassica carinata HOM05D006890 ORTHO05D009907 2.5e-08 62.4 119 35.3
Thhalv10020194m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 3.3e-08 62.0 138 33.3
AL1G39190 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 4.3e-08 61.6 59 44.1
BcaB07g33120 Brassica carinata HOM05D006890 ORTHO05D009907 9.6e-08 60.5 117 30.8
Carub.0004s2996 Capsella rubella HOM05D000621 ORTHO05D000421 1.3e-07 60.1 53 52.8
BcaB01g01117 Brassica carinata HOM05D006890 ORTHO05D009907 1.6e-07 59.7 91 37.4
BcaB01g01109 Brassica carinata HOM05D006890 ORTHO05D009907 2.1e-07 59.3 91 37.4
AT1G11420 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 4.8e-07 58.2 96 37.5
AT1G26540 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 8.1e-07 57.4 57 42.1
BcaB06g28181 Brassica carinata HOM05D006890 ORTHO05D009907 8.1e-07 57.4 74 37.8
CARHR002610 Cardamine hirsuta HOM05D000621 ORTHO05D000421 1.4e-06 56.6 58 44.8
CARHR005930 Cardamine hirsuta HOM05D000621 ORTHO05D000421 2.4e-06 55.8 58 43.1
AL6G35070 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 3.1e-06 55.5 105 32.4
BcaB05g23880 Brassica carinata HOM05D000621 ORTHO05D000421 5.3e-06 54.7 114 33.3
BcaB08g35588 Brassica carinata HOM05D006890 ORTHO05D000421 5.3e-06 54.7 52 44.2


User provided reference genes

Program Settings