Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 2.6e-67 258.8 158 100.0
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 2.6e-67 258.8 158 100.0
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 1.2e-64 250.0 158 95.6
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 1.2e-64 250.0 158 95.6
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 5.1e-63 244.6 158 96.2
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 7.0e-60 234.2 159 78.6
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 9.1e-60 233.8 158 75.3
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 4.0e-55 218.4 159 73.6
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 4.0e-55 218.4 159 73.6
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 6.7e-55 217.6 158 72.8
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 7.5e-54 214.2 158 71.5
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 3.7e-53 211.8 161 71.4
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.4e-52 209.9 158 70.3
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 4.5e-51 204.9 165 67.9
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 1.5e-49 199.9 158 69.0
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 1.5e-49 199.9 158 69.0
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 5.0e-42 174.9 160 62.5
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 5.0e-42 174.9 160 62.5
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.3e-29 133.7 158 53.2
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 4.9e-29 131.7 154 51.3
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.3e-26 123.6 164 54.3
BcaC02g07205 Brassica carinata HOM05D005211 ORTHO05D006148 2.9e-21 105.9 87 65.5
C04p70110 Brassica napus HOM05D012854 ORTHO05D006148 4.0e-15 85.5 55 78.2
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.0e-15 85.5 141 38.3
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.0e-15 85.5 141 38.3
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.0e-14 83.2 146 39.0
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-14 83.2 141 38.3
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.6e-14 82.8 146 40.4
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.8e-14 81.6 141 37.6
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.8e-14 80.9 141 37.6
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 9.8e-14 80.9 144 41.0
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 6.4e-13 78.2 153 36.6
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 6.4e-13 78.2 154 34.4
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 8.3e-13 77.8 111 44.1
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 8.3e-13 77.8 137 39.4
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 8.3e-13 77.8 147 39.5
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 1.1e-12 77.4 152 36.8
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.4e-12 77.0 146 37.0
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.9e-12 76.6 152 30.3
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.4e-12 76.3 150 44.0
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 9.2e-12 74.3 170 33.5
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 1.2e-11 73.9 165 40.6
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.2e-11 73.9 131 34.4
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 2.1e-11 73.2 152 35.5
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 3.5e-11 72.4 123 39.8
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 6.0e-11 71.6 149 36.2
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 6.0e-11 71.6 157 33.1
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 7.8e-11 71.2 151 33.8
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.0e-10 70.9 119 40.3
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.0e-10 70.9 131 35.9
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.3e-10 70.5 140 35.7
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.3e-10 70.5 140 35.7
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 1.3e-10 70.5 161 31.1
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.7e-10 70.1 145 35.2
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.7e-10 70.1 145 35.2
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.7e-10 70.1 140 36.4
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 1.7e-10 70.1 164 43.3
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.7e-10 70.1 163 33.1
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.3e-10 69.7 147 37.4
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.3e-10 69.7 143 35.0
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 3.0e-10 69.3 146 33.6
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 5.1e-10 68.6 139 35.3
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 5.1e-10 68.6 146 36.3
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 6.6e-10 68.2 147 32.7
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 6.6e-10 68.2 141 36.9
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.6e-10 67.8 104 39.4
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 8.6e-10 67.8 156 32.1
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 8.6e-10 67.8 154 31.8
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.1e-09 67.4 141 33.3
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.1e-09 67.4 134 35.1
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 1.5e-09 67.0 153 33.3
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.5e-09 67.0 136 36.0
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 1.5e-09 67.0 144 34.7
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 1.5e-09 67.0 165 29.1
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.5e-09 67.0 143 33.6
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.5e-09 66.2 156 31.4
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 3.3e-09 65.9 153 33.3
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 3.3e-09 65.9 155 31.0
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.3e-09 65.9 148 31.8
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 4.3e-09 65.5 156 31.4
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 5.6e-09 65.1 121 38.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 5.6e-09 65.1 149 32.2
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 7.3e-09 64.7 165 30.9
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 7.3e-09 64.7 149 31.5
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 9.5e-09 64.3 135 35.6
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 9.5e-09 64.3 157 31.2
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 9.5e-09 64.3 136 31.6
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 9.5e-09 64.3 134 36.6
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-08 63.9 154 32.5
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-08 63.9 154 32.5
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.6e-08 63.5 128 34.4
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 1.6e-08 63.5 162 40.7
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.6e-08 63.5 107 39.3
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 1.6e-08 63.5 141 36.2
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.6e-08 63.5 130 33.1
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 1.6e-08 63.5 174 36.8
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.1e-08 63.2 141 31.2
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 3.6e-08 62.4 131 35.1
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 3.6e-08 62.4 175 29.1
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.6e-08 62.4 143 34.3
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 6.2e-08 61.6 137 31.4
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 8.1e-08 61.2 141 31.9
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 1.1e-07 60.8 152 34.2
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.4e-07 60.5 152 30.3
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.8e-07 60.1 158 32.3
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 1.8e-07 60.1 145 33.1
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-07 59.7 158 32.3
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 3.1e-07 59.3 140 35.0
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 8.9e-07 57.8 140 30.7
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.2e-06 57.4 151 49.7
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.2e-06 57.4 159 28.9
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 1.5e-06 57.0 47 59.6
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.5e-06 57.0 159 30.8
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 2.0e-06 56.6 172 33.1
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 2.6e-06 56.2 139 32.4
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.6e-06 56.2 41 58.5
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.6e-06 56.2 159 28.9
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 2.6e-06 56.2 148 32.4
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.4e-06 55.8 138 31.2
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 3.4e-06 55.8 137 36.5
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 5.8e-06 55.1 101 38.6
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 9.9e-06 54.3 155 40.6
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 9.9e-06 54.3 112 37.5


User provided reference genes

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