Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 4.4e-55 217.6 102 100.0
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-53 213.0 99 100.0
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-43 179.9 103 85.4
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-43 179.5 106 82.1
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 6.3e-38 160.6 102 72.5
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-35 152.9 102 69.6
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 2.2e-35 152.1 102 69.6
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 2.9e-35 151.8 102 70.6
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 6.5e-35 150.6 102 68.6
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.5e-34 148.7 96 72.9
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 7.2e-34 147.1 103 69.9
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 2.1e-33 145.6 103 68.9
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 3.6e-33 144.8 100 70.0
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-33 144.4 103 67.0
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.8e-32 140.6 95 66.3
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.2e-31 139.8 95 64.2
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 3.7e-30 134.8 99 65.7
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 8.3e-30 133.7 101 63.4
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 4.1e-29 131.3 103 61.2
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 4.1e-29 131.3 103 61.2
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.1e-29 130.2 90 63.3
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.2e-28 129.8 100 59.0
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.7e-28 128.6 92 63.0
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 5.9e-28 127.5 92 63.0
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.0e-27 126.7 92 62.0
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 2.3e-27 125.6 104 62.5
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 2.9e-27 125.2 93 64.5
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 2.9e-27 125.2 103 61.2
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 2.9e-27 125.2 104 61.5
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 2.9e-27 125.2 93 64.5
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 2.9e-27 125.2 93 64.5
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 2.9e-27 125.2 103 61.2
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 2.9e-27 125.2 97 57.7
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.8e-27 124.8 93 64.5
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 1.1e-26 123.2 90 65.6
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.1e-26 123.2 95 62.1
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-26 122.9 96 61.5
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.5e-26 122.9 87 59.8
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.9e-26 122.5 89 62.9
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.5e-26 122.1 92 62.0
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 2.5e-26 122.1 89 62.9
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.5e-26 122.1 90 65.6
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.2e-26 121.3 96 60.4
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 7.2e-26 120.6 89 60.7
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 9.5e-26 120.2 92 64.1
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-25 119.8 99 59.6
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-25 119.8 89 67.4
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 1.6e-25 119.4 89 67.4
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 1.6e-25 119.4 89 67.4
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.1e-25 119.0 85 62.4
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 2.8e-25 118.6 92 58.7
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 3.6e-25 118.2 76 65.8
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-25 117.9 79 64.6
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 6.1e-25 117.5 108 57.4
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 8.0e-25 117.1 85 60.0
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-24 116.7 89 60.7
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-24 116.3 89 58.4
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-24 116.3 89 58.4
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-24 116.3 92 58.7
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 1.4e-24 116.3 92 58.7
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.8e-24 115.9 76 61.8
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.3e-24 115.5 89 59.6
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.0e-24 115.2 89 59.6
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 5.2e-24 114.4 85 60.0
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 5.2e-24 114.4 90 63.3
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 8.9e-24 113.6 93 57.0
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-23 113.2 89 65.2
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.4e-23 111.3 97 56.7
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.4e-23 111.3 92 58.7
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-23 110.9 76 63.2
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.2e-22 109.0 96 55.2
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.7e-22 108.2 93 53.8
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 8.3e-22 107.1 69 66.7
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 8.3e-22 107.1 92 50.0
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-21 106.7 80 58.8
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.1e-21 106.7 92 57.6
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 3.3e-18 95.1 66 57.6
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.5e-18 93.6 95 43.2
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.6e-17 92.8 88 50.0
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 3.6e-17 91.7 69 68.1
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.7e-17 91.3 97 52.6
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 6.1e-17 90.9 87 49.4
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-16 89.7 89 51.7
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.0e-16 88.2 89 53.9
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 6.8e-16 87.4 99 43.4
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.2e-15 86.7 87 47.1
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 2.0e-15 85.9 87 48.3
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 6.4e-14 80.9 88 47.7
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 6.4e-14 80.9 88 47.7
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 6.4e-14 80.9 88 47.7
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 8.3e-14 80.5 88 47.7
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 8.3e-14 80.5 88 47.7
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 2.4e-13 79.0 96 44.8
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 2.4e-13 79.0 86 46.5
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 4.1e-13 78.2 88 47.7
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 4.1e-13 78.2 83 48.2
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 3.0e-11 72.0 93 47.3
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 3.9e-11 71.6 90 47.8
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 3.9e-11 71.6 90 43.3
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 3.9e-11 71.6 90 47.8
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 6.6e-11 70.9 93 46.2
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 2.5e-10 68.9 85 41.2
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 1.2e-09 66.6 99 39.4
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 6.2e-09 64.3 85 38.8
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 1.8e-08 62.8 89 40.4


User provided reference genes

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