Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 6.1e-57 223.8 103 100.0
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 3.1e-53 211.5 103 97.1
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 9.2e-53 209.9 103 96.1
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 2.7e-52 208.4 103 95.1
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 2.4e-45 185.3 80 100.0
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 3.1e-40 168.3 103 78.6
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-35 152.1 103 71.8
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 3.0e-35 151.8 103 69.9
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 6.6e-35 150.6 103 70.9
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.9e-34 149.1 101 71.3
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 2.5e-34 148.7 103 71.8
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.3e-34 148.3 99 70.7
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 9.5e-34 146.7 103 67.0
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 3.4e-31 138.3 93 66.7
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 3.4e-31 138.3 93 66.7
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 3.4e-31 138.3 93 66.7
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 2.2e-30 135.6 93 67.7
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 6.4e-30 134.0 98 64.3
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 6.4e-30 134.0 98 64.3
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 3.2e-29 131.7 103 60.2
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.1e-29 131.3 91 67.0
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 4.1e-29 131.3 105 61.0
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 5.4e-29 131.0 93 64.5
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.2e-29 130.2 93 63.4
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 3.5e-28 128.3 105 60.0
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.5e-28 128.3 95 61.1
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 7.8e-28 127.1 107 61.7
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.0e-27 126.7 93 62.4
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-27 125.6 101 61.4
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.0e-27 125.2 93 65.6
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.0e-27 125.2 104 57.7
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.0e-27 125.2 104 57.7
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.1e-27 124.4 91 63.7
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 5.1e-27 124.4 91 62.6
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 5.1e-27 124.4 93 61.3
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 6.6e-27 124.0 96 59.4
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 6.6e-27 124.0 88 63.6
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-26 123.2 101 57.4
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-26 123.2 93 60.2
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.5e-26 122.1 96 59.4
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 3.3e-26 121.7 76 67.1
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 4.3e-26 121.3 91 61.5
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.6e-26 120.9 91 62.6
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 5.6e-26 120.9 91 61.5
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 5.6e-26 120.9 91 60.4
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 5.6e-26 120.9 91 61.5
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 5.6e-26 120.9 91 60.4
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 5.6e-26 120.9 91 60.4
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 9.5e-26 120.2 99 56.6
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.5e-26 120.2 97 57.7
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 1.6e-25 119.4 91 60.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-25 119.0 91 58.2
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 2.1e-25 119.0 93 57.0
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 2.1e-25 119.0 93 57.0
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 2.8e-25 118.6 107 57.0
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.8e-25 118.6 92 60.9
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-25 117.9 101 58.4
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.2e-25 117.5 94 57.4
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 6.2e-25 117.5 73 68.5
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.4e-24 115.5 75 62.7
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.0e-24 114.8 91 60.4
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-23 112.8 99 57.6
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.5e-23 112.8 97 57.7
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 3.4e-23 111.7 95 60.0
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 9.9e-23 110.2 101 52.5
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-22 109.8 76 61.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.7e-22 109.4 88 59.1
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.7e-22 109.4 93 55.9
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.2e-22 109.0 93 60.2
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 3.8e-22 108.2 92 58.7
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 3.8e-22 108.2 93 52.7
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-21 106.7 97 56.7
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.2e-21 105.1 92 56.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 6.0e-20 100.9 79 59.5
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.3e-18 95.1 99 45.5
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 4.3e-18 94.7 71 62.0
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 5.6e-18 94.4 76 52.6
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 7.3e-18 94.0 93 46.2
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 9.6e-18 93.6 66 62.1
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 4.8e-17 91.3 92 47.8
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 1.2e-15 86.7 106 42.5
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.5e-15 86.3 91 48.4
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.5e-15 86.3 91 48.4
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.0e-15 85.9 90 51.1
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 2.6e-15 85.5 87 48.3
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 7.6e-15 84.0 88 51.1
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 7.6e-15 84.0 92 48.9
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 9.9e-15 83.6 91 48.4
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.3e-14 83.2 89 50.6
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 1.3e-14 83.2 87 44.8
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.7e-14 82.8 88 46.6
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 1.7e-14 82.8 88 46.6
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 1.7e-14 82.8 88 46.6
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 2.2e-14 82.4 88 46.6
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 2.2e-14 82.4 88 46.6
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 8.4e-14 80.5 88 46.6
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.4e-13 79.7 91 47.3
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.4e-13 79.7 88 48.9
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.4e-13 79.0 99 45.5
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 5.4e-13 77.8 94 43.6
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 1.2e-12 76.6 94 42.6
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 2.5e-10 68.9 94 40.4
Carub.0005s2631 Capsella rubella HOM05D014590 ORTHO05D017585 1.3e-06 56.6 92 33.7


User provided reference genes

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