Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 9.8e-132 473.4 227 100.0
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 9.8e-132 473.4 227 100.0
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 5.9e-129 464.2 227 98.2
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 1.9e-127 459.1 227 96.0
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 6.8e-125 450.7 227 93.8
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 3.4e-124 448.4 227 93.4
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.3e-123 446.4 227 93.8
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 2.0e-121 439.1 214 98.1
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 9.5e-119 430.3 227 90.3
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 1.6e-118 429.5 217 93.5
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 4.7e-118 427.9 214 93.9
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 2.3e-117 425.6 217 92.6
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 4.9e-115 417.9 228 87.7
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 5.4e-114 414.5 228 86.4
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 7.1e-114 414.1 228 86.8
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.1e-113 412.5 228 86.0
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 8.1e-110 400.6 228 82.5
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 5.8e-108 394.4 229 85.6
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 3.7e-107 391.7 229 81.7
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 7.1e-106 387.5 216 83.3
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 3.5e-105 385.2 215 84.7
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 2.8e-102 375.6 212 85.4
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 6.2e-102 374.4 229 79.0
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 9.9e-100 367.1 287 64.8
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 5.4e-98 361.3 237 75.9
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 2.7e-97 359.0 224 76.8
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.7e-97 359.0 228 73.7
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 3.4e-84 315.5 163 94.5
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 9.6e-79 297.4 180 82.2
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 6.9e-77 291.2 225 60.9
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 2.6e-76 289.3 226 60.2
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 4.5e-76 288.5 194 67.5
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 5.8e-76 288.1 192 66.1
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 5.8e-76 288.1 220 61.8
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 7.6e-76 287.7 224 59.8
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 1.0e-75 287.3 214 62.6
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 1.0e-75 287.3 191 65.4
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 1.3e-75 287.0 224 58.9
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 1.3e-75 287.0 211 61.6
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 2.2e-75 286.2 204 62.7
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 3.8e-75 285.4 190 68.9
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 4.9e-75 285.0 192 66.1
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 6.5e-75 284.6 224 57.1
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 8.4e-75 284.3 192 65.1
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 8.4e-75 284.3 192 64.1
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 1.4e-74 283.5 226 58.8
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 2.5e-74 282.7 192 64.6
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 2.5e-74 282.7 210 60.5
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 4.2e-74 282.0 201 62.7
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 5.5e-74 281.6 209 61.2
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 1.2e-73 280.4 216 61.1
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 2.1e-73 279.6 192 64.6
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.7e-73 279.3 206 60.2
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 4.6e-73 278.5 192 64.1
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 4.6e-73 278.5 192 64.6
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 6.0e-73 278.1 192 63.0
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 6.0e-73 278.1 192 64.1
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 7.9e-73 277.7 206 60.7
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 7.9e-73 277.7 192 64.6
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 1.0e-72 277.3 191 64.4
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 1.3e-72 276.9 192 64.1
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 1.3e-72 276.9 193 67.4
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 1.3e-72 276.9 192 63.5
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 1.8e-72 276.6 192 63.5
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 1.8e-72 276.6 191 63.4
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 1.8e-72 276.6 200 62.5
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 5.1e-72 275.0 190 64.7
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 6.7e-72 274.6 226 55.8
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 8.7e-72 274.2 192 63.0
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.1e-71 273.9 224 55.8
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 1.1e-71 273.9 199 60.8
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 1.5e-71 273.5 228 57.0
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.9e-71 273.1 206 58.3
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 3.3e-71 272.3 191 63.4
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 3.3e-71 272.3 197 61.9
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 3.3e-71 272.3 191 63.9
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 4.3e-71 271.9 206 58.7
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 7.4e-71 271.2 217 56.2
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 9.6e-71 270.8 181 67.4
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 1.6e-70 270.0 197 62.9
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 1.6e-70 270.0 227 56.4
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 2.1e-70 269.6 194 60.8
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 2.1e-70 269.6 191 62.8
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 2.1e-70 269.6 206 58.3
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 2.8e-70 269.2 207 58.5
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 2.8e-70 269.2 193 62.7
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 2.8e-70 269.2 183 66.1
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 4.8e-70 268.5 192 60.9
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 6.2e-70 268.1 190 61.6
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 8.2e-70 267.7 206 57.8
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 8.2e-70 267.7 206 57.8
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 1.1e-69 267.3 181 65.2
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 1.4e-69 266.9 212 58.0
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 1.8e-69 266.5 192 62.5
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 2.4e-69 266.2 182 65.4
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 4.1e-69 265.4 226 56.2
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 2.0e-68 263.1 206 57.8
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 2.6e-68 262.7 191 62.3
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 3.4e-68 262.3 200 63.5
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.4e-68 262.3 192 60.4
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 4.5e-68 261.9 200 61.0
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.7e-67 260.0 171 70.2
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 3.8e-67 258.8 203 59.1
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 6.5e-67 258.1 181 63.0
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.1e-66 257.3 182 63.7
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.9e-66 256.5 188 61.7
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 5.5e-66 255.0 188 60.1
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 9.3e-66 254.2 193 59.1
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 9.3e-66 254.2 193 59.1
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 9.3e-66 254.2 193 59.1
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 9.3e-66 254.2 179 63.7
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 1.2e-65 253.8 193 59.6
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 1.2e-65 253.8 193 59.6
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 1.6e-65 253.4 216 54.6
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 2.3e-64 249.6 180 60.6
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 3.0e-64 249.2 188 58.0
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 3.0e-64 249.2 227 53.3
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 3.0e-64 249.2 204 55.9
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 2.5e-63 246.1 190 57.9
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 4.3e-63 245.4 184 61.4
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 4.8e-62 241.9 190 56.3
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 4.8e-62 241.9 191 58.6
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.5e-60 236.9 222 51.8
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 7.7e-60 234.6 177 61.0
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 7.2e-58 228.0 162 63.0
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 1.2e-57 227.3 203 52.2
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 3.6e-57 225.7 193 54.4
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 1.4e-56 223.8 162 62.3
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 2.3e-56 223.0 192 52.1
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 5.1e-56 221.9 197 54.8
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 5.9e-52 208.4 192 53.6
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.0e-51 207.6 145 63.4
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 1.4e-50 203.8 146 61.6
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 1.2e-49 200.7 150 64.0
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 4.7e-49 198.7 145 63.4
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 7.9e-49 198.0 154 63.0
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 4.8e-46 188.7 198 46.0
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 7.7e-44 181.4 197 47.2
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 4.8e-38 162.2 113 64.6
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 4.1e-37 159.1 117 62.4
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 6.5e-35 151.8 206 40.3
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 3.6e-33 146.0 203 40.4
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 9.1e-29 131.3 181 39.2
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 7.7e-28 128.3 180 40.0
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 6.5e-27 125.2 96 61.5
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 8.5e-27 124.8 180 39.4
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 8.5e-27 124.8 180 39.4
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 3.2e-26 122.9 81 66.7
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 1.4e-24 117.5 190 37.4
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.0e-24 116.3 83 66.3
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 9.8e-23 111.3 69 66.7
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 4.9e-22 109.0 101 51.5
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 4.9e-22 109.0 77 61.0
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 4.1e-21 105.9 223 33.2
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 2.0e-20 103.6 79 60.8
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.5e-18 97.4 62 61.3
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 1.9e-18 97.1 76 55.3
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 3.6e-17 92.8 76 53.9
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 3.6e-17 92.8 69 58.0
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 4.4e-15 85.9 163 35.6
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.3e-14 84.3 54 61.1
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 3.7e-14 82.8 148 33.1
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 3.7e-14 82.8 148 33.1
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 1.4e-13 80.9 148 34.5
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 7.0e-13 78.6 44 63.6
Cfa025661 Carpinus fangiana HOM05D004249 ORTHO05D005015 1.6e-09 67.4 132 34.1
BraA03t09486Z Brassica rapa HOM05D004249 ORTHO05D005015 6.8e-08 62.0 44 56.8


User provided reference genes

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