Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12056 Brassica carinata HOM05D008594 ORTHO05D010820 2.1e-81 305.4 137 100.0
C04p08400 Brassica napus HOM05D000139 ORTHO05D000103 5.0e-22 108.2 50 100.0
BolC4t22439H Brassica oleracea HOM05D000139 ORTHO05D000103 5.0e-22 108.2 50 100.0
BolC7t43534H Brassica oleracea HOM05D008594 ORTHO05D010820 1.2e-12 77.0 68 63.2
C03p81760 Brassica napus HOM05D008594 ORTHO05D010820 1.5e-10 70.1 36 91.7
BolC3t20447H Brassica oleracea HOM05D008594 ORTHO05D010820 1.5e-10 70.1 36 91.7
C02p39350 Brassica napus HOM05D008594 ORTHO05D010820 7.5e-10 67.8 36 88.9
BolC7t45816H Brassica oleracea HOM05D008594 ORTHO05D010820 7.5e-10 67.8 36 91.7
C03p45270 Brassica napus HOM05D008594 ORTHO05D010820 2.8e-09 65.9 36 91.7
C06p27300 Brassica napus HOM05D008594 ORTHO05D010820 2.8e-09 65.9 36 91.7
C09p63700 Brassica napus HOM05D008594 ORTHO05D010820 2.8e-09 65.9 36 91.7
BolC4t25598H Brassica oleracea HOM05D008594 ORTHO05D010820 2.8e-09 65.9 36 91.7
BolC5t29373H Brassica oleracea HOM05D008594 ORTHO05D010820 2.8e-09 65.9 36 91.7
C09p19570 Brassica napus HOM05D008594 ORTHO05D010820 6.3e-09 64.7 36 88.9
C02p18830 Brassica napus HOM05D008594 ORTHO05D010820 8.3e-09 64.3 36 88.9
C03p73620 Brassica napus HOM05D008594 ORTHO05D010820 8.3e-09 64.3 36 88.9
C05p34840 Brassica napus HOM05D008594 ORTHO05D010820 8.3e-09 64.3 36 88.9
BolC7t42411H Brassica oleracea HOM05D008594 ORTHO05D010820 1.4e-08 63.5 36 88.9
BolC9t54107H Brassica oleracea HOM05D008594 ORTHO05D010820 1.4e-08 63.5 36 88.9
C06p04450 Brassica napus HOM05D008594 ORTHO05D010820 1.8e-08 63.2 36 88.9
BolC2t10126H Brassica oleracea HOM05D008594 ORTHO05D010820 1.8e-08 63.2 36 86.1
BolC9t58592H Brassica oleracea HOM05D008594 ORTHO05D010820 1.8e-08 63.2 36 86.1
C03p24880 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-08 62.8 36 86.1
C05p30930 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-08 62.8 36 88.9
C08p26910 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-08 62.8 36 88.9
C09p44770 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-08 62.8 36 88.9
C09p57240 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-08 62.8 36 86.1
BolC9t57351H Brassica oleracea HOM05D008594 ORTHO05D010820 2.4e-08 62.8 36 88.9
BolC8t47374H Brassica oleracea HOM05D008594 ORTHO05D010820 7.0e-08 61.2 36 83.3
C03p29250 Brassica napus HOM05D008594 ORTHO05D010820 9.1e-08 60.8 36 86.1
C05p56540 Brassica napus HOM05D008594 ORTHO05D040328 9.1e-08 60.8 32 93.8
BolC6t38368H Brassica oleracea HOM05D008594 ORTHO05D010820 1.6e-07 60.1 36 83.3
TWI56G0932 Tripterygium wilfordii HOM05D000935 ORTHO05D001483 3.5e-07 58.9 45 62.2
AT1G76490 Arabidopsis thaliana HOM05D000935 ORTHO05D001483 4.5e-07 58.5 41 65.9
Carub.0002s2340 Capsella rubella HOM05D000935 ORTHO05D001483 4.5e-07 58.5 41 65.9
CARHR070040 Cardamine hirsuta HOM05D000935 ORTHO05D001483 4.5e-07 58.5 41 65.9
BolC2t07626H Brassica oleracea HOM05D008594 ORTHO05D010820 5.9e-07 58.2 36 83.3
Aa31LG4G6580 Aethionema arabicum HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
BcaC08g47155 Brassica carinata HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
BcaC08g47240 Brassica carinata HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
A07p42150 Brassica napus HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
C06p50720 Brassica napus HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
BolC6t40098H Brassica oleracea HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
BraA07t31744Z Brassica rapa HOM05D000935 ORTHO05D001483 7.7e-07 57.8 41 65.9
Duzib132G0659 Durio zibethinus HOM05D000935 ORTHO05D001483 1.0e-06 57.4 41 68.3
THA.LOC104812013 Tarenaya hassleriana HOM05D000935 ORTHO05D001483 1.0e-06 57.4 55 52.7
AL2G36630 Arabidopsis lyrata HOM05D000935 ORTHO05D001483 1.3e-06 57.0 41 63.4
C02p28150 Brassica napus HOM05D008594 ORTHO05D010820 1.3e-06 57.0 32 87.5
CsaV3_6G035980 Cucumis sativus L. HOM05D000935 ORTHO05D001483 1.3e-06 57.0 41 65.9
Eucgr.F01818 Eucalyptus grandis HOM05D000935 ORTHO05D001483 1.7e-06 56.6 41 65.9
Ciclev10000761m.g Citrus clementina HOM05D000935 ORTHO05D001483 2.3e-06 56.2 41 65.9
Thhalv10018320m.g Eutrema salsugineum HOM05D000935 ORTHO05D001483 2.3e-06 56.2 41 63.4
THA.LOC104809909 Tarenaya hassleriana HOM05D000935 ORTHO05D001483 2.3e-06 56.2 55 50.9
GSVIVG01013435001 Vitis vinifera HOM05D000935 ORTHO05D001483 2.3e-06 56.2 41 63.4
Manes.05G128600 Manihot esculenta HOM05D000935 ORTHO05D001483 2.9e-06 55.8 41 63.4
BcaC03g15677 Brassica carinata HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 61.0
A02p20730 Brassica napus HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 61.0
C02p32970 Brassica napus HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 61.0
BolC2t09397H Brassica oleracea HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 61.0
BraA02t07105Z Brassica rapa HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 61.0
Cpa.g.sc232.9 Carica papaya HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 58.5
TWI12G0952 Tripterygium wilfordii HOM05D000935 ORTHO05D001483 3.8e-06 55.5 41 63.4
Atru.chr3.59 Acer truncatum HOM05D000935 ORTHO05D001483 5.0e-06 55.1 46 54.3
BolC4t27537H Brassica oleracea HOM05D008594 ORTHO05D010820 5.0e-06 55.1 40 75.0
Cpa.g.sc26.7 Carica papaya HOM05D000935 ORTHO05D001483 5.0e-06 55.1 41 61.0
ClCG08G009150 Citrullus lanatus HOM05D000935 ORTHO05D001483 5.0e-06 55.1 41 63.4
Sp5g31650 Schrenkiella parvula HOM05D000935 ORTHO05D001483 5.0e-06 55.1 41 61.0
MELO3C026512.2 Cucumis melo HOM05D000935 ORTHO05D001483 6.6e-06 54.7 41 63.4
Gohir.A04G110960 Gossypium hirsutum HOM05D000935 ORTHO05D001483 6.6e-06 54.7 45 57.8
Gohir.A04G111100 Gossypium hirsutum HOM05D000935 ORTHO05D001483 6.6e-06 54.7 45 57.8
Gohir.A13G064100 Gossypium hirsutum HOM05D000935 ORTHO05D001483 6.6e-06 54.7 41 61.0
Gorai.012G138100 Gossypium raimondii HOM05D000935 ORTHO05D001483 6.6e-06 54.7 45 57.8
Gorai.013G065200 Gossypium raimondii HOM05D000935 ORTHO05D001483 6.6e-06 54.7 41 61.0
CiPaw.07G132900 Carya illinoinensis HOM05D000935 ORTHO05D001483 8.6e-06 54.3 41 61.0


User provided reference genes

Program Settings