Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.1e-85 320.1 177 100.0
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.0e-43 180.6 103 85.4
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 5.6e-34 148.3 85 84.7
BolC4t22593H Brassica oleracea HOM05D001498 ORTHO05D019959 8.1e-33 144.4 89 96.6
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 2.0e-31 139.8 102 69.6
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 1.9e-29 133.3 77 84.4
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 2.4e-29 132.9 77 84.4
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 7.9e-28 127.9 90 72.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.0e-27 127.5 72 86.1
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 4.3e-26 122.1 103 60.2
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 4.3e-26 122.1 103 62.1
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 9.6e-26 120.9 103 62.1
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 2.8e-25 119.4 103 60.2
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 4.8e-25 118.6 103 60.2
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 4.8e-25 118.6 103 59.2
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 8.1e-25 117.9 103 59.2
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.1e-24 117.5 94 62.8
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 3.8e-22 109.0 101 55.4
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 6.5e-22 108.2 100 57.0
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 6.5e-22 108.2 94 59.6
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 2.5e-21 106.3 88 60.2
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 3.2e-21 105.9 55 96.4
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.2e-20 104.0 115 50.4
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 4.6e-20 102.1 110 51.8
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 7.9e-20 101.3 106 54.7
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.0e-19 100.9 113 50.4
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.3e-19 99.8 100 54.0
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 5.1e-19 98.6 82 59.8
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.5e-18 97.1 107 48.6
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.5e-18 97.1 105 50.5
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 4.3e-18 95.5 111 51.4
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 7.4e-18 94.7 98 56.1
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 1.6e-17 93.6 109 47.7
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.6e-17 93.6 109 48.6
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.6e-17 93.6 109 48.6
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-17 93.2 109 48.6
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.8e-17 92.8 109 48.6
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.8e-17 92.8 100 51.0
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 3.7e-17 92.4 95 52.6
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 4.8e-17 92.0 109 48.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 6.2e-17 91.7 86 54.7
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 6.2e-17 91.7 86 52.3
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 6.2e-17 91.7 109 48.6
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.1e-16 90.9 109 48.6
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 1.4e-16 90.5 109 46.8
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-16 90.5 109 47.7
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-16 90.1 109 47.7
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-16 90.1 105 48.6
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.4e-16 89.7 132 44.7
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 2.4e-16 89.7 109 46.8
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.1e-16 89.4 97 47.4
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 3.1e-16 89.4 104 48.1
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 3.1e-16 89.4 109 45.9
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 4.1e-16 89.0 109 45.9
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 5.3e-16 88.6 127 44.1
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 9.0e-16 87.8 132 44.7
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 9.0e-16 87.8 109 45.9
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 9.0e-16 87.8 71 62.0
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 1.5e-15 87.0 72 62.5
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-15 87.0 105 46.7
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.5e-15 87.0 102 48.0
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.5e-15 87.0 105 46.7
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.0e-15 86.7 109 46.8
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.0e-15 86.7 109 46.8
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-15 86.7 105 46.7
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 2.6e-15 86.3 85 50.6
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 2.6e-15 86.3 132 45.5
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 2.6e-15 86.3 71 62.0
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-15 86.3 86 52.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 3.4e-15 85.9 105 46.7
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 4.5e-15 85.5 63 65.1
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 4.5e-15 85.5 109 45.9
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-15 85.5 100 48.0
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 5.8e-15 85.1 73 60.3
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 5.8e-15 85.1 71 59.2
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-14 84.3 100 48.0
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-14 84.3 104 46.2
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-14 83.6 103 45.6
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-14 83.2 103 44.7
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 3.8e-14 82.4 90 48.9
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 3.8e-14 82.4 105 43.8
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 3.8e-14 82.4 100 49.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 3.8e-14 82.4 105 44.8
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 5.0e-14 82.0 71 59.2
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 5.0e-14 82.0 105 44.8
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 5.0e-14 82.0 105 43.8
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 6.5e-14 81.6 94 50.0
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 6.5e-14 81.6 105 43.8
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 8.4e-14 81.3 85 49.4
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.4e-13 80.5 100 45.0
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 1.4e-13 80.5 71 57.7
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 3.2e-13 79.3 100 45.0
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 3.2e-13 79.3 80 51.2
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-13 79.3 100 45.0
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 3.2e-13 79.3 100 45.0
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 4.2e-13 79.0 73 54.8
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 4.2e-13 79.0 102 46.1
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 7.2e-13 78.2 107 44.9
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 9.3e-13 77.8 105 41.9
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 2.1e-12 76.6 76 51.3
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-12 76.6 103 42.7
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.7e-12 76.3 92 46.7
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 2.7e-12 76.3 79 50.6
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 3.5e-12 75.9 77 53.2
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 3.5e-12 75.9 100 41.0
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 4.6e-12 75.5 101 43.6
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 6.1e-12 75.1 100 45.0
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 7.9e-12 74.7 92 47.8
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 1.3e-11 73.9 99 44.4
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.3e-11 73.9 96 44.8
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.8e-11 73.6 80 50.0
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 1.8e-11 73.6 68 52.9
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 2.3e-11 73.2 100 44.0
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.9e-11 72.4 106 42.5
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 5.1e-11 72.0 100 44.0
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 2.5e-10 69.7 77 49.4
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 7.4e-10 68.2 77 48.1
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-09 66.6 91 46.2
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 8.2e-09 64.7 74 45.9
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.1e-08 64.3 74 50.0
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.4e-08 63.9 92 46.7
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 1.4e-08 63.9 70 52.9
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 1.4e-08 63.9 77 48.1
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 9.0e-08 61.2 103 38.8
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 1.2e-07 60.8 89 39.3
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 3.4e-07 59.3 95 45.3
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 4.5e-07 58.9 102 37.3
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 1.0e-06 57.8 97 39.2
BcaB05g23245 Brassica carinata HOM05D008414 ORTHO05D095473 1.0e-06 57.8 102 37.3
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 1.7e-06 57.0 108 34.3
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 2.2e-06 56.6 72 44.4
BcaB06g26481 Brassica carinata HOM05D008414 ORTHO05D094346 2.9e-06 56.2 63 47.6
BcaB06g26761 Brassica carinata HOM05D008414 ORTHO05D091670 3.8e-06 55.8 102 36.3
BcaB07g33139 Brassica carinata HOM05D001498 ORTHO05D092157 3.8e-06 55.8 47 55.3
BcaB07g33218 Brassica carinata HOM05D008414 ORTHO05D014108 5.0e-06 55.5 63 44.4
BcaC01g02359 Brassica carinata HOM05D032582 ORTHO05D039274 5.0e-06 55.5 44 65.9
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 5.0e-06 55.5 88 39.8
BcaB02g11314 Brassica carinata HOM05D008414 ORTHO05D094225 6.5e-06 55.1 63 46.0
BcaB06g27026 Brassica carinata HOM05D008414 ORTHO05D090558 6.5e-06 55.1 102 37.3
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 8.5e-06 54.7 95 43.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 8.5e-06 54.7 67 47.8


User provided reference genes

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