Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11825 Brassica carinata HOM05D017424 ORTHO05D094481 1.8e-215 752.3 379 100.0
BolC4t28028H Brassica oleracea HOM05D000722 ORTHO05D000025 1.1e-106 391.0 333 67.0
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 1.4e-85 320.9 382 52.1
BolC3t13227H Brassica oleracea HOM05D017424 ORTHO05D027693 6.1e-54 215.7 237 55.3
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 1.8e-53 214.2 374 41.7
BolC4t22689H Brassica oleracea HOM05D017424 ORTHO05D027693 4.0e-53 213.0 200 61.5
C04p10950 Brassica napus HOM05D017424 ORTHO05D027693 1.5e-52 211.1 193 63.7
BcaC06g35412 Brassica carinata HOM05D010893 ORTHO05D016035 1.3e-51 208.0 320 44.4
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 4.9e-51 206.1 180 60.6
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 5.0e-48 196.1 184 57.6
BcaB01g05329 Brassica carinata HOM05D017424 ORTHO05D027693 2.1e-46 190.7 216 56.0
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 8.9e-45 185.3 178 56.7
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 5.4e-42 176.0 373 38.1
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 9.5e-31 138.7 292 39.0
C06p45540 Brassica napus HOM05D017424 ORTHO05D032352 1.2e-28 131.7 366 32.8
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 3.4e-28 130.2 147 51.0
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 4.4e-28 129.8 147 50.3
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 4.4e-28 129.8 147 50.3
BraA06t23408Z Brassica rapa HOM05D001897 ORTHO05D001953 1.4e-26 124.8 121 57.9
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 1.2e-25 121.7 231 41.1
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 2.7e-25 120.6 184 42.9
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 7.8e-25 119.0 240 40.4
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.3e-24 117.5 398 33.2
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 3.9e-24 116.7 240 39.2
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 8.7e-24 115.5 231 40.7
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 2.5e-23 114.0 242 38.8
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 2.1e-22 110.9 91 63.7
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 2.1e-22 110.9 107 56.1
BcaB04g21169 Brassica carinata HOM05D014255 ORTHO05D015450 2.8e-22 110.5 313 34.5
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 4.7e-22 109.8 205 40.0
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 8.1e-22 109.0 216 43.1
C07p38420 Brassica napus HOM05D010893 ORTHO05D016035 8.1e-22 109.0 118 52.5
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 9.0e-21 105.5 205 39.5
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 4.4e-20 103.2 136 45.6
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.7e-19 101.3 113 52.2
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 2.9e-19 100.5 154 42.2
C07p18370 Brassica napus HOM05D009754 ORTHO05D033217 4.9e-19 99.8 211 36.5
BolC4t25298H Brassica oleracea HOM05D009754 ORTHO05D020043 4.2e-18 96.7 308 34.4
C02p10230 Brassica napus HOM05D011556 ORTHO05D014123 2.1e-17 94.4 93 51.6
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 2.7e-17 94.0 145 46.2
C01p28120 Brassica napus HOM05D023179 ORTHO05D039492 4.6e-17 93.2 314 34.1
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 1.3e-16 91.7 93 51.6
BcaC04g22003 Brassica carinata HOM05D023179 ORTHO05D039492 3.9e-16 90.1 315 34.9
C08p42710 Brassica napus HOM05D011556 ORTHO05D014123 1.9e-15 87.8 86 51.2
C08p49870 Brassica napus HOM05D011556 ORTHO05D041066 1.9e-15 87.8 93 49.5
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 3.3e-15 87.0 93 49.5
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 7.3e-15 85.9 93 49.5
BolC8t52515H Brassica oleracea HOM05D011556 ORTHO05D041066 9.6e-15 85.5 93 48.4
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 1.3e-11 75.1 211 34.1
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 1.9e-10 71.2 112 40.2
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 2.4e-10 70.9 41 75.6
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 2.3e-08 64.3 198 33.3
C09p24950 Brassica napus HOM05D023179 ORTHO05D103903 3.0e-08 63.9 137 43.1
C02p36550 Brassica napus HOM05D014255 ORTHO05D039464 7.4e-07 59.3 83 42.2
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 2.1e-06 57.8 73 42.5
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 2.8e-06 57.4 74 44.6
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 4.8e-06 56.6 75 44.0
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 4.8e-06 56.6 47 61.7
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 8.1e-06 55.8 55 50.9


User provided reference genes

Program Settings