Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11567 Brassica carinata HOM05D000137 ORTHO05D012927 1.5e-37 159.5 110 100.0
C08p43520 Brassica napus HOM05D000137 ORTHO05D000503 3.4e-29 131.7 150 56.7
BolC8t51898H Brassica oleracea HOM05D000137 ORTHO05D000503 3.4e-29 131.7 150 56.7
BcaC01g03577 Brassica carinata HOM05D000137 ORTHO05D012927 5.8e-29 131.0 150 56.7
C03p50960 Brassica napus HOM05D000137 ORTHO05D012927 5.8e-29 131.0 150 56.7
BcaC06g36043 Brassica carinata HOM05D000137 ORTHO05D012927 2.2e-28 129.0 146 56.8
A09p60080 Brassica napus HOM05D000137 ORTHO05D000503 4.9e-28 127.9 150 55.3
BraA09t41377Z Brassica rapa HOM05D000137 ORTHO05D000503 4.9e-28 127.9 150 55.3
C02p11050 Brassica napus HOM05D000137 ORTHO05D012927 1.9e-27 125.9 145 66.2
BolC2t07177H Brassica oleracea HOM05D000137 ORTHO05D012927 1.9e-27 125.9 145 66.2
A01p00480 Brassica napus HOM05D000137 ORTHO05D012927 5.4e-27 124.4 145 65.5
C03p51850 Brassica napus HOM05D000137 ORTHO05D012927 2.7e-26 122.1 145 54.5
BraA04t16450Z Brassica rapa HOM05D000137 ORTHO05D012927 6.0e-26 120.9 148 54.7
AL1G30520 Arabidopsis lyrata HOM05D000137 ORTHO05D000503 1.1e-24 116.7 149 51.7
AT1G18150 Arabidopsis thaliana HOM05D000137 ORTHO05D000503 2.5e-24 115.5 149 51.0
Thhalv10007165m.g Eutrema salsugineum HOM05D000137 ORTHO05D000503 4.3e-24 114.8 149 51.0
Carub.0001s1779 Capsella rubella HOM05D000137 ORTHO05D000503 2.8e-23 112.1 149 55.7
BcaB07g31828 Brassica carinata HOM05D000137 ORTHO05D000503 8.1e-23 110.5 147 50.3
CARHR018710 Cardamine hirsuta HOM05D000137 ORTHO05D000503 8.1e-23 110.5 150 50.7
A06p14170 Brassica napus HOM05D000137 ORTHO05D000503 1.4e-22 109.8 147 49.7
BcaNung05434 Brassica carinata HOM05D000137 ORTHO05D000503 1.8e-22 109.4 150 48.7
C05p16450 Brassica napus HOM05D000137 ORTHO05D000503 2.4e-22 109.0 147 53.1
Sp1g16140 Schrenkiella parvula HOM05D000137 ORTHO05D000503 5.2e-22 107.8 149 50.3
BcaC03g13899 Brassica carinata HOM05D000137 ORTHO05D012927 6.8e-22 107.5 118 59.3
BcaC07g41343 Brassica carinata HOM05D000137 ORTHO05D000503 6.8e-22 107.5 150 63.3
BraA06t24549Z Brassica rapa HOM05D000137 ORTHO05D000503 6.8e-22 107.5 147 49.7
C08p18440 Brassica napus HOM05D000137 ORTHO05D000503 1.2e-21 106.7 148 48.0
A08p03980 Brassica napus HOM05D000137 ORTHO05D012927 2.0e-21 105.9 110 62.7
BraA08t32427Z Brassica rapa HOM05D000137 ORTHO05D012927 2.0e-21 105.9 110 62.7
BcaC05g25706 Brassica carinata HOM05D000137 ORTHO05D000503 6.4e-20 100.9 150 58.0
BolC5t30341H Brassica oleracea HOM05D000137 ORTHO05D000503 6.4e-20 100.9 150 58.0
A10p17990 Brassica napus HOM05D000137 ORTHO05D012927 5.6e-16 87.8 137 48.2
A08p21540 Brassica napus HOM05D018440 ORTHO05D012927 9.6e-16 87.0 103 56.3
AL2G33460 Arabidopsis lyrata HOM05D000137 ORTHO05D000503 1.1e-14 83.6 154 46.1
Aa31LG7G2930 Aethionema arabicum HOM05D000137 ORTHO05D000503 1.5e-13 79.7 160 40.6
Carub.0002s2042 Capsella rubella HOM05D000137 ORTHO05D000503 4.4e-13 78.2 152 42.8
Sp5g28850 Schrenkiella parvula HOM05D000137 ORTHO05D000503 1.7e-12 76.3 153 41.2
BcaB03g15722 Brassica carinata HOM05D000137 ORTHO05D000503 2.9e-12 75.5 153 41.2
BcaNung07349 Brassica carinata HOM05D000137 ORTHO05D000503 2.9e-12 75.5 153 41.2
AT1G73670 Arabidopsis thaliana HOM05D000137 ORTHO05D000503 6.4e-12 74.3 154 42.2
A07p29730 Brassica napus HOM05D000137 ORTHO05D000503 6.4e-12 74.3 152 40.8
BcaC08g45628 Brassica carinata HOM05D000137 ORTHO05D000503 1.1e-11 73.6 152 40.8
BraA07t30612Z Brassica rapa HOM05D000137 ORTHO05D000503 1.9e-11 72.8 152 40.8
THA.LOC104812163 Tarenaya hassleriana HOM05D000137 ORTHO05D000503 4.2e-11 71.6 151 39.7
Duzib068G0456 Durio zibethinus HOM05D000137 ORTHO05D000503 7.1e-11 70.9 113 39.8
C06p33910 Brassica napus HOM05D000137 ORTHO05D000503 1.2e-10 70.1 152 40.1
BolC6t38504H Brassica oleracea HOM05D000137 ORTHO05D000503 1.2e-10 70.1 152 40.1
Aa31LG4G3980 Aethionema arabicum HOM05D000137 ORTHO05D000503 6.0e-10 67.8 152 38.8
Actinidia39847 Actinidia chinensis HOM05D000137 ORTHO05D014725 1.5e-08 63.2 104 40.4
Manes.14G169900 Manihot esculenta HOM05D000137 ORTHO05D000503 1.9e-08 62.8 145 33.1
CARHR066740 Cardamine hirsuta HOM05D000137 ORTHO05D000503 3.6e-07 58.5 127 38.6
Potri.015G040300 Populus trichocarpa HOM05D000137 ORTHO05D000503 4.8e-07 58.2 157 32.5
Ciclev10007788m.g Citrus clementina HOM05D000137 ORTHO05D000503 1.1e-06 57.0 151 33.1
Gohir.D11G003400 Gossypium hirsutum HOM05D000137 ORTHO05D000503 1.4e-06 56.6 144 32.6
Gorai.007G004400 Gossypium raimondii HOM05D000137 ORTHO05D000503 1.4e-06 56.6 144 32.6
Gohir.A11G003900 Gossypium hirsutum HOM05D000137 ORTHO05D000503 1.8e-06 56.2 144 32.6
Atru.chr9.1755 Acer truncatum HOM05D000137 ORTHO05D000503 2.4e-06 55.8 146 33.6
Duzib205G1280 Durio zibethinus HOM05D000137 ORTHO05D000503 4.0e-06 55.1 146 30.8
FvH4_5g17180 Fragaria vesca HOM05D000137 ORTHO05D000503 4.0e-06 55.1 155 34.8
Prupe.5G231400 Prunus persica HOM05D000137 ORTHO05D000503 4.0e-06 55.1 156 30.8
CSS0006093 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000503 5.3e-06 54.7 156 32.1
DCAR_014729 Daucus carota HOM05D000137 ORTHO05D000503 5.3e-06 54.7 142 35.9
FAN13G2831 Fragaria x ananassa HOM05D000137 ORTHO05D000503 9.0e-06 53.9 155 34.2


User provided reference genes

Program Settings