Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 8.2e-79 297.0 148 100.0
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 2.8e-71 271.9 148 93.2
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-69 265.8 148 91.2
BcaC08g42872 Brassica carinata HOM05D007462 ORTHO05D011074 6.5e-68 260.8 148 89.9
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 6.7e-65 250.8 148 84.5
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 6.7e-65 250.8 148 84.5
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 6.7e-65 250.8 148 84.5
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-64 249.6 148 84.5
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 2.0e-64 249.2 148 83.8
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 7.4e-64 247.3 148 83.8
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 6.3e-63 244.2 148 82.4
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 1.7e-60 236.1 148 81.8
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 3.5e-53 211.8 135 77.8
BolC3t21233H Brassica oleracea HOM05D007462 ORTHO05D011074 1.0e-52 210.3 148 76.4
BcaC09g50767 Brassica carinata HOM05D007462 ORTHO05D011074 2.9e-52 208.8 141 75.9
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 3.2e-51 205.3 143 73.4
BcaC05g25404 Brassica carinata HOM05D007462 ORTHO05D011074 6.8e-41 171.0 148 66.2
BcaC03g13628 Brassica carinata HOM05D007462 ORTHO05D011074 5.7e-40 167.9 148 65.5
BcaC02g08626 Brassica carinata HOM05D007462 ORTHO05D011074 4.1e-38 161.8 135 69.6
CARHR258030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 7.0e-38 161.0 137 60.6
BolC7t44542H Brassica oleracea HOM05D007462 ORTHO05D011074 8.9e-25 117.5 59 88.1
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 7.5e-24 114.4 132 47.0
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 9.8e-24 114.0 132 47.0
BcaC03g17084 Brassica carinata HOM05D007462 ORTHO05D011074 9.8e-24 114.0 132 46.2
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 7.0e-22 107.8 132 43.2
BcaC04g22963 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-21 107.1 132 42.4
BolC9t54236H Brassica oleracea HOM05D007462 ORTHO05D011074 1.2e-21 107.1 132 42.4
BcaC03g15871 Brassica carinata HOM05D007462 ORTHO05D011074 5.6e-19 98.2 52 84.6
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.2e-18 97.1 138 39.9
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 8.1e-18 94.4 87 49.4
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 5.2e-17 91.7 127 41.7
BcaC04g23556 Brassica carinata HOM05D007462 ORTHO05D011074 6.8e-17 91.3 132 39.4
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 6.8e-17 91.3 131 38.9
AT2G37125 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.0e-16 89.7 112 43.8
Carub.0012s0017 Capsella rubella HOM05D007462 ORTHO05D011074 2.0e-16 89.7 91 49.5
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 1.9e-14 83.2 72 50.0
BcaB03g16439 Brassica carinata HOM05D007462 ORTHO05D011074 1.7e-12 76.6 131 35.9
BcaB07g32457 Brassica carinata HOM05D007462 ORTHO05D002086 1.7e-12 76.6 110 41.8
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 6.6e-12 74.7 95 38.9
CARHR217030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 6.6e-12 74.7 78 43.6
CARHR117010 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.1e-11 73.9 51 70.6
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-11 73.6 95 41.1
BolC4t27363H Brassica oleracea HOM05D007462 ORTHO05D002086 1.9e-11 73.2 95 37.9
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 4.3e-11 72.0 76 42.1
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 7.3e-11 71.2 76 42.1
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 7.3e-11 71.2 84 45.2
BraA01t02125Z Brassica rapa HOM05D007462 ORTHO05D002086 7.3e-11 71.2 93 38.7
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 7.3e-11 71.2 76 40.8
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 9.5e-11 70.9 76 47.4
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 1.2e-10 70.5 93 38.7
BolC4t26247H Brassica oleracea HOM05D007462 ORTHO05D002086 3.6e-10 68.9 93 37.6
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 4.7e-10 68.6 93 38.7
BcaC01g03692 Brassica carinata HOM05D007462 ORTHO05D002086 4.7e-10 68.6 76 46.1
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 4.7e-10 68.6 76 46.1
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 6.2e-10 68.2 99 39.4
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 8.1e-10 67.8 99 39.4
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 1.1e-09 67.4 136 36.0
BcaB02g10757 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-09 66.6 96 38.5
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 3.1e-09 65.9 84 38.1
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 4.0e-09 65.5 115 32.2
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 5.2e-09 65.1 118 33.9
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 6.8e-09 64.7 96 37.5
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 8.9e-09 64.3 72 41.7
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 8.9e-09 64.3 76 42.1
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 1.2e-08 63.9 72 41.7
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-08 63.5 82 39.0
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 1.5e-08 63.5 76 42.1
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 1.5e-08 63.5 122 32.8
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 3.4e-08 62.4 113 33.6
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 3.4e-08 62.4 119 36.1
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 4.4e-08 62.0 97 35.1
BcaC05g28128 Brassica carinata HOM05D007462 ORTHO05D002086 4.4e-08 62.0 96 36.5
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 4.4e-08 62.0 73 41.1
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 4.4e-08 62.0 73 41.1
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 5.8e-08 61.6 89 32.6
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 5.8e-08 61.6 89 32.6
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 5.8e-08 61.6 97 37.1
BcaB04g20307 Brassica carinata HOM05D007462 ORTHO05D002086 7.6e-08 61.2 50 56.0
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 9.9e-08 60.8 68 42.6
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 9.9e-08 60.8 54 46.3
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-07 60.5 97 37.1
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-07 60.5 97 36.1
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-07 60.5 97 36.1
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-07 60.1 85 36.5
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 1.7e-07 60.1 55 47.3
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 1.7e-07 60.1 55 47.3
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 1.7e-07 60.1 65 43.1
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 1.7e-07 60.1 65 43.1
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-07 60.1 97 37.1
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-07 60.1 97 37.1
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 1.7e-07 60.1 72 40.3
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-07 59.7 117 29.1
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 59.7 97 34.0
BcaC04g20023 Brassica carinata HOM05D007462 ORTHO05D011074 2.2e-07 59.7 119 31.9
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 59.7 97 34.0
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 2.2e-07 59.7 125 31.2
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-07 59.3 98 34.7
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 2.9e-07 59.3 87 40.2
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-07 58.9 102 34.3
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 3.8e-07 58.9 65 43.1
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-07 58.9 96 33.3
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-07 58.9 96 33.3
CARHR113850 Cardamine hirsuta HOM05D000675 ORTHO05D002086 3.8e-07 58.9 92 34.8
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 4.9e-07 58.5 148 33.1
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 4.9e-07 58.5 107 28.0
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 4.9e-07 58.5 85 37.6
BcaC08g43955 Brassica carinata HOM05D000675 ORTHO05D032734 4.9e-07 58.5 110 29.1
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 4.9e-07 58.5 105 34.3
BolC6t36520H Brassica oleracea HOM05D000675 ORTHO05D032734 4.9e-07 58.5 110 29.1
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.9e-07 58.5 123 30.9
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 6.4e-07 58.2 84 35.7
BcaB04g18178 Brassica carinata HOM05D000675 ORTHO05D011634 6.4e-07 58.2 124 30.6
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 6.4e-07 58.2 90 36.7
BcaC04g21573 Brassica carinata HOM05D007462 ORTHO05D002086 6.4e-07 58.2 93 35.5
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 6.4e-07 58.2 55 49.1
BolC4t23471H Brassica oleracea HOM05D007462 ORTHO05D002086 6.4e-07 58.2 51 52.9
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 8.4e-07 57.8 118 37.3
BolC2t09536H Brassica oleracea HOM05D000675 ORTHO05D002086 8.4e-07 57.8 54 46.3
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 8.4e-07 57.8 52 48.1
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 96 34.4
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 91 34.1
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 87 34.5
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 91 34.1
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 1.1e-06 57.4 67 43.3
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 1.1e-06 57.4 67 43.3
BcaB05g22457 Brassica carinata HOM05D007462 ORTHO05D002086 1.4e-06 57.0 69 42.0
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-06 57.0 71 33.8
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 57.0 91 34.1
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 57.0 97 36.1
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 1.4e-06 57.0 96 33.3
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.4e-06 57.0 75 38.7
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-06 56.6 107 31.8
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 1.9e-06 56.6 56 46.4
C06p13230 Brassica napus HOM05D000675 ORTHO05D032924 1.9e-06 56.6 96 31.2
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.9e-06 56.6 67 44.8
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-06 56.2 56 46.4
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-06 56.2 56 46.4
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-06 56.2 129 27.1
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-06 56.2 56 46.4
BolC6t38866H Brassica oleracea HOM05D000675 ORTHO05D002086 2.4e-06 56.2 80 38.8
BolC8t46873H Brassica oleracea HOM05D000675 ORTHO05D002086 2.4e-06 56.2 121 31.4
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 3.2e-06 55.8 111 30.6
Carub.0003s2743 Capsella rubella HOM05D000675 ORTHO05D002086 3.2e-06 55.8 104 32.7
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 4.2e-06 55.5 121 28.9
BolC2t11221H Brassica oleracea HOM05D000675 ORTHO05D002086 4.2e-06 55.5 83 33.7
BolC5t33625H Brassica oleracea HOM05D000675 ORTHO05D002086 4.2e-06 55.5 53 45.3
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.2e-06 55.5 111 33.3
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 4.2e-06 55.5 79 35.4
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 5.4e-06 55.1 126 28.6
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 5.4e-06 55.1 91 34.1
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 5.4e-06 55.1 85 35.3
BcaC03g17205 Brassica carinata HOM05D000675 ORTHO05D002086 5.4e-06 55.1 109 32.1
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 5.4e-06 55.1 97 34.0
BcaC06g35605 Brassica carinata HOM05D000675 ORTHO05D002086 5.4e-06 55.1 83 34.9
BcaC09g51679 Brassica carinata HOM05D000675 ORTHO05D002086 5.4e-06 55.1 121 33.1
BraA03t15123Z Brassica rapa HOM05D000675 ORTHO05D002086 5.4e-06 55.1 119 31.9
BcaC01g04356 Brassica carinata HOM05D000675 ORTHO05D002086 7.1e-06 54.7 57 40.4
C06p13560 Brassica napus HOM05D000675 ORTHO05D032734 7.1e-06 54.7 117 28.2
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 7.1e-06 54.7 55 40.0
Aa31sc290G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 9.2e-06 54.3 75 41.3
Aa31sc36G130 Aethionema arabicum HOM05D000675 ORTHO05D002086 9.2e-06 54.3 75 41.3
BcaB04g19467 Brassica carinata HOM05D000675 ORTHO05D002086 9.2e-06 54.3 96 30.2
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 9.2e-06 54.3 85 34.1
BcaC03g16749 Brassica carinata HOM05D000675 ORTHO05D002086 9.2e-06 54.3 97 34.0
BcaC03g18180 Brassica carinata HOM05D000675 ORTHO05D002086 9.2e-06 54.3 96 37.5
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 9.2e-06 54.3 56 44.6
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 9.2e-06 54.3 56 44.6
BolC6t36730H Brassica oleracea HOM05D007462 ORTHO05D011074 9.2e-06 54.3 48 54.2
BraA04t16110Z Brassica rapa HOM05D000675 ORTHO05D002086 9.2e-06 54.3 125 34.4


User provided reference genes

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