Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11232 Brassica carinata HOM05D008524 ORTHO05D010700 4.5e-30 134.0 73 100.0
BcaC02g11230 Brassica carinata HOM05D008524 ORTHO05D010700 3.2e-28 127.9 73 94.5
Thhalv10017816m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 2.0e-25 118.6 73 91.8
BcaB01g04049 Brassica carinata HOM05D008524 ORTHO05D010700 9.1e-23 109.8 72 86.1
BcaC01g05960 Brassica carinata HOM05D008524 ORTHO05D010700 9.1e-23 109.8 72 86.1
BcaC01g05973 Brassica carinata HOM05D008524 ORTHO05D010700 2.0e-22 108.6 72 86.1
BcaC01g05959 Brassica carinata HOM05D008524 ORTHO05D010700 5.9e-22 107.1 74 85.1
A03p17480 Brassica napus HOM05D008524 ORTHO05D010700 7.7e-22 106.7 74 83.8
Sp4g13820 Schrenkiella parvula HOM05D008524 ORTHO05D010700 1.0e-21 106.3 73 80.8
BcaB06g28555 Brassica carinata HOM05D008524 ORTHO05D010700 2.3e-21 105.1 74 85.1
AL4G26580 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 3.8e-21 104.4 71 78.9
Carub.0004s1266 Capsella rubella HOM05D008524 ORTHO05D010700 5.0e-21 104.0 71 77.5
AT2G31345 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.1e-20 102.8 71 77.5
BcaC02g07976 Brassica carinata HOM05D008524 ORTHO05D010700 4.2e-20 100.9 74 82.4
BolC4t27606H Brassica oleracea HOM05D008524 ORTHO05D010700 4.2e-20 100.9 74 82.4
CARHR124970 Cardamine hirsuta HOM05D008524 ORTHO05D010700 6.1e-19 97.1 72 75.0
Carub.0001s0546 Capsella rubella HOM05D008524 ORTHO05D010700 1.2e-17 92.8 72 73.6
CARHR005640 Cardamine hirsuta HOM05D008524 ORTHO05D010700 7.5e-17 90.1 72 66.7
Aa31LG5G5610 Aethionema arabicum HOM05D008524 ORTHO05D010700 9.8e-17 89.7 70 70.0
AT1G06135 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.7e-16 89.0 72 70.8
Aa31LG1G7130 Aethionema arabicum HOM05D008524 ORTHO05D010700 1.9e-12 75.5 72 62.5
BraA10t45219Z Brassica rapa HOM05D008524 ORTHO05D010700 4.7e-11 70.9 44 86.4
BraA03t13690Z Brassica rapa HOM05D008524 ORTHO05D010700 1.4e-10 69.3 52 75.0
Thhalv10009900m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 8.9e-10 66.6 73 61.6
CARHR005650 Cardamine hirsuta HOM05D008524 ORTHO05D010700 1.5e-09 65.9 68 60.3
AT1G06137 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 2.0e-09 65.5 69 59.4
AL4G26560 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 3.7e-08 61.2 73 53.4
BcaB06g28556 Brassica carinata HOM05D008524 ORTHO05D010700 2.4e-07 58.5 72 47.2
BraA10t42738Z Brassica rapa HOM05D008524 ORTHO05D010700 7.0e-07 57.0 70 54.3
THA.LOC104826208 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 1.2e-06 56.2 73 54.8
BcaC05g24308 Brassica carinata HOM05D008524 ORTHO05D010700 1.6e-06 55.8 70 52.9
C05p04400 Brassica napus HOM05D008524 ORTHO05D010700 1.6e-06 55.8 70 52.9
BolC5t29213H Brassica oleracea HOM05D008524 ORTHO05D010700 1.6e-06 55.8 70 52.9
Carub.0004s1264 Capsella rubella HOM05D008524 ORTHO05D010700 4.6e-06 54.3 71 45.1
THA.LOC104800884 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 4.6e-06 54.3 74 54.1
BcaB02g06823 Brassica carinata HOM05D008524 ORTHO05D010700 6.0e-06 53.9 70 52.9
BcaC02g11228 Brassica carinata HOM05D008524 ORTHO05D010700 7.8e-06 53.5 73 45.2


User provided reference genes

Program Settings