Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11230 Brassica carinata HOM05D008524 ORTHO05D010700 2.4e-31 138.3 73 100.0
BcaC02g11232 Brassica carinata HOM05D008524 ORTHO05D010700 3.8e-29 131.0 73 94.5
Thhalv10017816m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 1.5e-25 119.0 73 89.0
BcaB01g04049 Brassica carinata HOM05D008524 ORTHO05D010700 4.9e-24 114.0 72 87.5
BcaC01g05960 Brassica carinata HOM05D008524 ORTHO05D010700 4.9e-24 114.0 72 87.5
BcaC01g05973 Brassica carinata HOM05D008524 ORTHO05D010700 5.4e-23 110.5 72 84.7
AL4G26580 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 7.0e-23 110.2 71 81.7
Carub.0004s1266 Capsella rubella HOM05D008524 ORTHO05D010700 9.1e-23 109.8 71 80.3
BcaC01g05959 Brassica carinata HOM05D008524 ORTHO05D010700 1.6e-22 109.0 74 83.8
AT2G31345 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 2.0e-22 108.6 71 80.3
A03p17480 Brassica napus HOM05D008524 ORTHO05D010700 2.0e-22 108.6 74 82.4
Sp4g13820 Schrenkiella parvula HOM05D008524 ORTHO05D010700 7.7e-22 106.7 73 78.1
BcaB06g28555 Brassica carinata HOM05D008524 ORTHO05D010700 1.7e-21 105.5 74 82.4
CARHR124970 Cardamine hirsuta HOM05D008524 ORTHO05D010700 1.1e-20 102.8 72 77.8
BcaC02g07976 Brassica carinata HOM05D008524 ORTHO05D010700 3.3e-20 101.3 74 79.7
BolC4t27606H Brassica oleracea HOM05D008524 ORTHO05D010700 3.3e-20 101.3 74 79.7
Aa31LG5G5610 Aethionema arabicum HOM05D008524 ORTHO05D010700 5.2e-18 94.0 70 72.9
Carub.0001s0546 Capsella rubella HOM05D008524 ORTHO05D010700 1.5e-17 92.4 72 69.4
CARHR005640 Cardamine hirsuta HOM05D008524 ORTHO05D010700 3.4e-17 91.3 72 66.7
AT1G06135 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 3.7e-16 87.8 72 66.7
Aa31LG1G7130 Aethionema arabicum HOM05D008524 ORTHO05D010700 3.3e-12 74.7 72 58.3
CARHR005650 Cardamine hirsuta HOM05D008524 ORTHO05D010700 2.8e-11 71.6 68 63.2
BraA10t45219Z Brassica rapa HOM05D008524 ORTHO05D010700 3.6e-11 71.2 44 86.4
AT1G06137 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.0e-10 69.7 69 60.9
BraA03t13690Z Brassica rapa HOM05D008524 ORTHO05D010700 1.0e-10 69.7 51 76.5
Thhalv10009900m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 2.3e-10 68.6 73 60.3
AL4G26560 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 8.9e-10 66.6 73 54.8
BcaB06g28556 Brassica carinata HOM05D008524 ORTHO05D010700 3.4e-09 64.7 72 50.0
Carub.0004s1264 Capsella rubella HOM05D008524 ORTHO05D010700 1.1e-07 59.7 71 46.5
BcaC02g11228 Brassica carinata HOM05D008524 ORTHO05D010700 1.4e-07 59.3 73 47.9
BcaC05g24308 Brassica carinata HOM05D008524 ORTHO05D010700 1.4e-07 59.3 70 52.9
C05p04400 Brassica napus HOM05D008524 ORTHO05D010700 1.4e-07 59.3 70 52.9
BolC5t29213H Brassica oleracea HOM05D008524 ORTHO05D010700 1.4e-07 59.3 70 52.9
BraA10t42738Z Brassica rapa HOM05D008524 ORTHO05D010700 1.9e-07 58.9 70 52.9
THA.LOC104826208 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 5.4e-07 57.4 73 54.8
BcaB02g06823 Brassica carinata HOM05D008524 ORTHO05D010700 7.0e-07 57.0 70 52.9
Carub.0001s0547 Capsella rubella HOM05D008524 ORTHO05D010700 9.2e-07 56.6 71 52.1
THA.LOC104800884 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 3.5e-06 54.7 74 51.4
Aa31LG5G5630 Aethionema arabicum HOM05D008524 ORTHO05D010700 4.6e-06 54.3 69 44.9
BcaC07g42144 Brassica carinata HOM05D008524 ORTHO05D010700 6.0e-06 53.9 73 49.3
C08p51390 Brassica napus HOM05D008524 ORTHO05D010700 6.0e-06 53.9 73 49.3
BolC8t52665H Brassica oleracea HOM05D008524 ORTHO05D010700 6.0e-06 53.9 73 49.3
A09p67110 Brassica napus HOM05D008524 ORTHO05D010700 7.8e-06 53.5 73 49.3


User provided reference genes

Program Settings