Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11189 Brassica carinata HOM05D000496 ORTHO05D011778 8.7e-67 256.9 137 100.0
BcaC04g21670 Brassica carinata HOM05D000496 ORTHO05D011778 4.9e-54 214.5 134 86.6
BcaC06g35985 Brassica carinata HOM05D000496 ORTHO05D027087 7.2e-37 157.5 138 70.3
BcaC03g13801 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-31 139.4 127 67.7
BcaC04g20980 Brassica carinata HOM05D000496 ORTHO05D027087 5.0e-30 134.8 128 67.2
BcaC07g37410 Brassica carinata HOM05D003678 ORTHO05D004340 2.3e-27 125.9 92 73.9
BcaC04g20755 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-23 112.1 137 56.9
BcaC07g38017 Brassica carinata HOM05D000496 ORTHO05D015464 5.7e-18 94.7 76 65.8
BcaC01g02809 Brassica carinata HOM05D000496 ORTHO05D027087 2.2e-17 92.8 140 47.9
BcaC04g21545 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-17 90.9 76 63.2
BcaC02g10863 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-16 90.5 71 67.6
BcaC06g34642 Brassica carinata HOM05D000496 ORTHO05D015464 1.1e-16 90.5 97 54.6
BcaC08g43573 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-16 90.5 71 66.2
C04p24340 Brassica napus HOM05D000496 ORTHO05D015464 1.1e-16 90.5 71 67.6
BcaC03g16223 Brassica carinata HOM05D000496 ORTHO05D015464 1.8e-16 89.7 76 63.2
BcaC03g16224 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-16 89.4 76 63.2
BcaC02g11007 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-16 89.0 85 57.6
BcaC06g34907 Brassica carinata HOM05D037950 ORTHO05D011778 7.0e-16 87.8 81 65.4
BcaC04g21077 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-15 86.3 97 52.6
BcaC01g02914 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-15 84.3 92 52.2
BcaC08g45526 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-14 83.2 82 57.3
BcaC03g16675 Brassica carinata HOM05D000496 ORTHO05D015464 3.8e-14 82.0 97 51.5
BcaC04g20694 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-13 80.5 66 59.1
BcaC04g21033 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-13 80.5 95 50.5
BcaC03g16461 Brassica carinata HOM05D000496 ORTHO05D015464 2.5e-13 79.3 73 61.6
BcaC07g37689 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-13 77.8 96 47.9
BcaC09g49845 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-13 77.4 96 46.9
BcaC06g35199 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-12 75.9 91 50.5
BcaC01g02355 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-12 75.5 96 45.8
BcaC03g16322 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-12 75.5 96 44.8
BcaC02g10431 Brassica carinata HOM05D000496 ORTHO05D092068 4.7e-12 75.1 93 44.1
BcaB05g24301 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-11 73.9 92 47.8
BolC9t55287H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-11 73.2 93 44.1
BcaC02g10623 Brassica carinata HOM05D003757 ORTHO05D004892 3.0e-11 72.4 96 41.7
BcaC03g16547 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-11 72.0 95 47.4
BcaC04g20746 Brassica carinata HOM05D011171 ORTHO05D000411 4.0e-11 72.0 95 46.3
BcaC06g35802 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-11 72.0 92 46.7
BcaB05g23868 Brassica carinata HOM05D000496 ORTHO05D016019 6.8e-11 71.2 70 57.1
BcaC01g02246 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-10 69.7 96 41.7
BcaC02g09713 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-10 68.6 68 48.5
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 7.5e-10 67.8 51 64.7
BcaC03g15779 Brassica carinata HOM05D001075 ORTHO05D001779 7.5e-10 67.8 99 43.4
BcaC03g16549 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-10 67.8 92 42.4
BcaC07g37384 Brassica carinata HOM05D000496 ORTHO05D015464 9.8e-10 67.4 99 42.4
BcaC08g43740 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-10 67.4 85 49.4
BcaC06g36038 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-09 65.5 79 49.4
BcaC03g16259 Brassica carinata HOM05D000496 ORTHO05D000166 6.3e-09 64.7 89 37.1
BcaC03g16876 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-09 64.3 76 52.6
BcaC01g01334 Brassica carinata HOM05D000496 ORTHO05D031866 1.8e-08 63.2 99 43.4
BcaC04g20955 Brassica carinata HOM05D000496 ORTHO05D015483 1.8e-08 63.2 70 51.4
BolC9t56588H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-08 63.2 70 51.4
BcaB01g01424 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-08 62.8 93 43.0
BcaC04g22084 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-08 62.8 71 43.7
C06p19990 Brassica napus HOM05D000496 ORTHO05D000411 2.4e-08 62.8 70 50.0
BolC2t10890H Brassica oleracea HOM05D000496 ORTHO05D000411 4.1e-08 62.0 70 45.7
BcaC04g21026 Brassica carinata HOM05D045545 ORTHO05D039694 5.4e-08 61.6 70 51.4
BcaB03g16449 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-08 60.8 93 40.9
BcaB01g01355 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 60.5 53 64.2
BcaC04g19988 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 60.5 93 45.2
BcaC04g20907 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 60.5 92 43.5
C09p38100 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-07 60.5 92 43.5
BolC9t56646H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-07 60.5 92 43.5
BcaC03g14287 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 59.7 87 48.3
A09p25190 Brassica napus HOM05D000496 ORTHO05D024139 2.0e-07 59.7 123 35.8
BcaC07g37118 Brassica carinata HOM05D000496 ORTHO05D015464 2.7e-07 59.3 51 56.9
BcaC08g44536 Brassica carinata HOM05D000496 ORTHO05D015464 2.7e-07 59.3 51 58.8
BcaB05g23634 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-07 58.9 79 48.1
BcaC08g44818 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-07 58.5 87 39.1
BolC5t32326H Brassica oleracea HOM05D000496 ORTHO05D032758 4.5e-07 58.5 85 42.4
BraA05t22059Z Brassica rapa HOM05D000496 ORTHO05D024139 4.5e-07 58.5 77 46.8
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 1.3e-06 57.0 93 41.9
BcaC05g27332 Brassica carinata HOM05D000048 ORTHO05D000411 1.3e-06 57.0 97 44.3
BolC2t08410H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-06 57.0 126 34.9
BcaB05g22924 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 56.6 100 42.0
BcaC04g20777 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 56.6 85 43.5
BcaC06g34940 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 56.6 85 43.5
C09p39390 Brassica napus HOM05D000496 ORTHO05D000411 1.7e-06 56.6 85 43.5
BolC9t56812H Brassica oleracea HOM05D000496 ORTHO05D000411 1.7e-06 56.6 85 43.5
BcaC05g27615 Brassica carinata HOM05D000496 ORTHO05D032758 2.9e-06 55.8 75 41.3
C05p36020 Brassica napus HOM05D000496 ORTHO05D000411 2.9e-06 55.8 85 41.2
BolC9t58039H Brassica oleracea HOM05D000496 ORTHO05D024139 2.9e-06 55.8 77 42.9
BcaC04g20748 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-06 55.1 93 41.9
BcaB03g16436 Brassica carinata HOM05D000496 ORTHO05D094521 6.6e-06 54.7 86 45.3
BcaC04g20747 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-06 54.7 85 43.5
BolC9t55245H Brassica oleracea HOM05D000165 ORTHO05D001328 8.6e-06 54.3 101 37.6


User provided reference genes

Program Settings