Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11175 Brassica carinata HOM05D009265 ORTHO05D011682 1.0e-57 227.3 192 100.0
C04p19730 Brassica napus HOM05D009265 ORTHO05D011682 1.0e-57 227.3 192 100.0
BolC4t23506H Brassica oleracea HOM05D009265 ORTHO05D011682 1.0e-57 227.3 192 100.0
BraA05t20402Z Brassica rapa HOM05D009265 ORTHO05D011682 1.7e-55 219.9 192 91.1
A05p14740 Brassica napus HOM05D009265 ORTHO05D011682 1.8e-54 216.5 192 91.1
A04p23620 Brassica napus HOM05D009265 ORTHO05D011682 1.0e-41 174.1 192 69.3
BraA04t17888Z Brassica rapa HOM05D009265 ORTHO05D011682 1.0e-41 174.1 192 69.3
BcaB06g28461 Brassica carinata HOM05D009265 ORTHO05D011682 1.4e-41 173.7 192 69.8
BolC4t27505H Brassica oleracea HOM05D009265 ORTHO05D011682 1.4e-41 173.7 192 69.8
Thhalv10017317m.g Eutrema salsugineum HOM05D009265 ORTHO05D011682 4.4e-40 168.7 192 68.2
Sp4g13400 Schrenkiella parvula HOM05D009265 ORTHO05D011682 5.7e-40 168.3 192 75.5
BcaB02g10349 Brassica carinata HOM05D009265 ORTHO05D095729 2.0e-37 159.8 192 82.8
BcaB06g28394 Brassica carinata HOM05D009265 ORTHO05D011682 1.1e-35 154.1 192 57.8
CARHR124430 Cardamine hirsuta HOM05D009265 ORTHO05D011682 5.2e-33 145.2 192 63.0
Carub.0004s1213 Capsella rubella HOM05D009265 ORTHO05D011682 1.2e-29 134.0 190 61.6
AT2G30930 Arabidopsis thaliana HOM05D009265 ORTHO05D011682 1.7e-28 130.2 189 47.1
AL4G25870 Arabidopsis lyrata HOM05D009265 ORTHO05D011682 2.0e-24 116.7 187 52.9
AT1G06540 Arabidopsis thaliana HOM05D009265 ORTHO05D011682 4.8e-23 112.1 106 51.9
AL1G16570 Arabidopsis lyrata HOM05D009265 ORTHO05D011682 2.4e-22 109.8 93 55.9
C04p60020 Brassica napus HOM05D004710 ORTHO05D005445 2.4e-22 109.8 160 66.2
Carub.0001s0591 Capsella rubella HOM05D009265 ORTHO05D011682 5.4e-22 108.6 93 54.8
Sp1g05300 Schrenkiella parvula HOM05D009265 ORTHO05D011682 9.1e-22 107.8 94 54.3
Thhalv10009408m.g Eutrema salsugineum HOM05D009265 ORTHO05D011682 1.6e-21 107.1 108 50.0
THA.LOC104826235 Tarenaya hassleriana HOM05D009265 ORTHO05D011682 4.5e-21 105.5 93 54.8
A10p05190 Brassica napus HOM05D009265 ORTHO05D011682 1.9e-19 100.1 93 52.7
BcaB02g06782 Brassica carinata HOM05D009265 ORTHO05D011682 2.5e-19 99.8 92 51.1
THA.LOC104800822 Tarenaya hassleriana HOM05D009265 ORTHO05D011682 3.3e-19 99.4 99 51.5
BolC5t29252H Brassica oleracea HOM05D009265 ORTHO05D011682 5.5e-19 98.6 93 52.7
BraA10t42786Z Brassica rapa HOM05D009265 ORTHO05D011682 5.5e-19 98.6 93 52.7
Aa31LG1G7640 Aethionema arabicum HOM05D009265 ORTHO05D011682 2.8e-18 96.3 119 41.2
Aa31LG5G5990 Aethionema arabicum HOM05D009265 ORTHO05D011682 2.4e-14 83.2 113 42.5
C04p60080 Brassica napus HOM05D009265 ORTHO05D033113 3.1e-09 66.2 74 48.6
BolC4t27511H Brassica oleracea HOM05D009265 ORTHO05D033113 3.1e-09 66.2 74 48.6
A04p23630 Brassica napus HOM05D009265 ORTHO05D033113 8.9e-09 64.7 74 47.3


User provided reference genes

Program Settings