Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11171 Brassica carinata HOM05D004373 ORTHO05D005203 1.1e-110 403.3 199 100.0
BcaB06g28458 Brassica carinata HOM05D004373 ORTHO05D005203 2.9e-79 298.9 226 72.1
Thhalv10016964m.g Eutrema salsugineum HOM05D004373 ORTHO05D005203 2.9e-79 298.9 224 72.8
Sp4g13390 Schrenkiella parvula HOM05D004373 ORTHO05D005203 2.9e-79 298.9 224 72.3
A04p23610 Brassica napus HOM05D004373 ORTHO05D005203 3.8e-79 298.5 224 72.3
CARHR124420 Cardamine hirsuta HOM05D004373 ORTHO05D005203 3.8e-79 298.5 224 71.9
C04p60040 Brassica napus HOM05D004373 ORTHO05D005203 6.5e-79 297.7 226 71.7
BcaB02g10348 Brassica carinata HOM05D004373 ORTHO05D005203 2.5e-78 295.8 226 71.7
BraA04t17887Z Brassica rapa HOM05D004373 ORTHO05D005203 1.2e-77 293.5 237 67.9
Carub.0004s1212 Capsella rubella HOM05D004373 ORTHO05D005203 3.9e-76 288.5 224 68.8
Aa31LG5G6000 Aethionema arabicum HOM05D004373 ORTHO05D005203 3.3e-75 285.4 224 68.8
AT2G30920 Arabidopsis thaliana HOM05D004373 ORTHO05D005203 5.7e-75 284.6 224 66.5
AL4G25860 Arabidopsis lyrata HOM05D004373 ORTHO05D005203 9.6e-75 283.9 224 67.0
BcaB06g28393 Brassica carinata HOM05D004373 ORTHO05D005203 9.0e-73 277.3 224 67.4
THA.LOC104800821 Tarenaya hassleriana HOM05D004373 ORTHO05D005203 1.4e-70 270.0 224 64.3
QL07p014019 Quercus lobata HOM05D004373 ORTHO05D005203 3.2e-70 268.9 224 62.5
Phvul.008G264200 Phaseolus vulgaris HOM05D004373 ORTHO05D005203 1.6e-69 266.5 224 61.6
arahy.Tifrunner.gnm1.ann1.JRDS1A Arachis hypogaea HOM05D004373 ORTHO05D005203 3.6e-69 265.4 224 62.1
Aqoxy1G01913 Aquilegia oxysepala HOM05D004373 ORTHO05D005203 7.9e-69 264.2 224 61.6
RcHm_v2.0_Chr2g0150821 Rosa chinensis HOM05D004373 ORTHO05D005203 7.9e-69 264.2 224 62.1
Eucgr.D00004 Eucalyptus grandis HOM05D004373 ORTHO05D005203 1.0e-68 263.8 224 61.6
Glyma.02G288400 Glycine max HOM05D004373 ORTHO05D005203 1.3e-68 263.5 224 61.2
arahy.Tifrunner.gnm1.ann1.GN05X3 Arachis hypogaea HOM05D004373 ORTHO05D005203 1.8e-68 263.1 224 61.6
Ciclev10017823m.g Citrus clementina HOM05D004373 ORTHO05D005203 1.8e-68 263.1 224 62.9
FvH4_6g37760 Fragaria vesca HOM05D004373 ORTHO05D005203 1.8e-68 263.1 224 62.5
Gohir.D01G165500 Gossypium hirsutum HOM05D004373 ORTHO05D005203 2.3e-68 262.7 224 63.8
Gorai.002G205900 Gossypium raimondii HOM05D004373 ORTHO05D005203 2.3e-68 262.7 224 63.8
TWI60G0341 Tripterygium wilfordii HOM05D004373 ORTHO05D005203 2.3e-68 262.7 224 60.3
VMungo0647G0741 Vigna mungo HOM05D004373 ORTHO05D005203 3.0e-68 262.3 224 60.3
AUR62041333 Chenopodium quinoa HOM05D004373 ORTHO05D005203 3.9e-68 261.9 224 60.7
FAN02G0860 Fragaria x ananassa HOM05D004373 ORTHO05D005203 3.9e-68 261.9 242 58.7
Hma1.2p1_0178F.1_g078200 Hydrangea macrophylla HOM05D004373 ORTHO05D005203 5.1e-68 261.5 224 62.5
Atru.chr6.3556 Acer truncatum HOM05D004373 ORTHO05D005203 6.7e-68 261.2 224 61.2
COL.COLO4_33707 Corchorus olitorius HOM05D004373 ORTHO05D005203 6.7e-68 261.2 224 63.8
FAN05G3369 Fragaria x ananassa HOM05D004373 ORTHO05D005203 6.7e-68 261.2 224 62.1
FAN14G0255 Fragaria x ananassa HOM05D004373 ORTHO05D005203 6.7e-68 261.2 224 62.1
Gohir.A01G174300 Gossypium hirsutum HOM05D004373 ORTHO05D005203 6.7e-68 261.2 224 63.4
EL10Ac9g21021 Beta vulgaris HOM05D004373 ORTHO05D005203 8.7e-68 260.8 224 60.7
CARHR124890 Cardamine hirsuta HOM05D004373 ORTHO05D005203 8.7e-68 260.8 198 68.2
Ca_06293_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 8.7e-68 260.8 224 60.7
Nn3g21008 Nelumbo nucifera HOM05D004373 ORTHO05D005203 8.7e-68 260.8 224 62.1
Thecc.01G158800 Theobroma cacao HOM05D004373 ORTHO05D005203 1.1e-67 260.4 227 63.4
CiPaw.03G195500 Carya illinoinensis HOM05D004373 ORTHO05D005203 1.5e-67 260.0 224 60.7
RcHm_v2.0_Chr4g0446711 Rosa chinensis HOM05D004373 ORTHO05D005203 1.5e-67 260.0 224 60.3
PGR042G0892 Punica granatum HOM05D004373 ORTHO05D005203 2.5e-67 259.2 226 62.4
Haze_13471 Corylus avellana HOM05D004373 ORTHO05D005203 3.3e-67 258.8 224 60.3
Glyma.14G026600 Glycine max HOM05D004373 ORTHO05D005203 4.3e-67 258.5 224 59.8
Medtr5g091910 Medicago truncatula HOM05D004373 ORTHO05D005203 5.7e-67 258.1 224 60.3
Potri.014G093100 Populus trichocarpa HOM05D004373 ORTHO05D005203 5.7e-67 258.1 224 60.7
Solyc07g055850.4 Solanum lycopersicum HOM05D004373 ORTHO05D005203 5.7e-67 258.1 224 61.2
Sopen07g029220 Solanum pennellii HOM05D004373 ORTHO05D005203 5.7e-67 258.1 224 61.2
Manes.12G048800 Manihot esculenta HOM05D004373 ORTHO05D005203 9.7e-67 257.3 224 62.1
Psat2g014440 Pisum sativum HOM05D004373 ORTHO05D005203 2.2e-66 256.1 224 60.7
Cc05_g09170 Coffea canephora HOM05D004373 ORTHO05D005203 2.8e-66 255.8 224 60.7
FAN09G0397 Fragaria x ananassa HOM05D003004 ORTHO05D003860 2.8e-66 255.8 221 60.6
HanXRQChr10g0305621 Helianthus annuus HOM05D004373 ORTHO05D005203 2.8e-66 255.8 224 60.7
Lsat_1_v5_gn_8_31981 Lactuca sativa HOM05D004373 ORTHO05D005203 2.8e-66 255.8 224 60.3
Lalb_Chr10g0106811 Lupinus albus HOM05D004373 ORTHO05D005203 2.8e-66 255.8 224 60.3
TPR.G12597 Trifolium pratense HOM05D004373 ORTHO05D005203 2.8e-66 255.8 224 60.3
Dinv12714 Davidia involucrata HOM05D004373 ORTHO05D005203 3.7e-66 255.4 224 60.3
Lj2g0023469 Lotus japonicus HOM05D004373 ORTHO05D005203 4.8e-66 255.0 224 59.4
Peaxi162Scf00154g00813 Petunia axillaris HOM05D004373 ORTHO05D005203 4.8e-66 255.0 224 60.3
SGA_v2.0_scaffold34G13681 Striga asiatica HOM05D004373 ORTHO05D005203 4.8e-66 255.0 224 61.2
CAN.G1481.10 Capsicum annuum HOM05D004373 ORTHO05D005203 6.3e-66 254.6 224 60.3
ECA233G5691 Erigeron canadensis HOM05D004373 ORTHO05D005203 6.3e-66 254.6 224 61.6
Actinidia11187 Actinidia chinensis HOM05D004373 ORTHO05D005203 1.1e-65 253.8 224 59.8
MSTRG.6768 Avicennia marina HOM05D004373 ORTHO05D005203 1.1e-65 253.8 224 59.4
Prupe.3G169300 Prunus persica HOM05D004373 ORTHO05D005203 1.1e-65 253.8 224 58.9
LjContig00222g0009609 Lotus japonicus HOM05D004373 ORTHO05D005203 1.8e-65 253.1 224 59.8
SalBow7G3596 Salvia bowleyana HOM05D004373 ORTHO05D005203 1.8e-65 253.1 224 60.7
DCAR_013302 Daucus carota HOM05D004373 ORTHO05D005203 3.1e-65 252.3 224 58.5
ATR0213G014 Amborella trichopoda HOM05D004373 ORTHO05D005203 5.3e-65 251.5 224 58.9
CSS0005427 Camellia sinensis var. sinensis HOM05D004373 ORTHO05D005203 1.2e-64 250.4 224 59.4
HanXRQChr13g0386831 Helianthus annuus HOM05D004373 ORTHO05D005203 1.2e-64 250.4 224 60.3
MD17G1142800 Malus domestica HOM05D004373 ORTHO05D005203 3.4e-64 248.8 226 58.8
Migut.M00217 Erythranthe guttata HOM05D004373 ORTHO05D005203 4.5e-64 248.4 224 58.9
Ah.01g016050 Amaranthus hybridus HOM05D004373 ORTHO05D005203 7.7e-64 247.7 224 58.9
RcHm_v2.0_Chr7g0218911 Rosa chinensis HOM05D004373 ORTHO05D005203 7.7e-64 247.7 200 64.5
SGA_v2.0_scaffold265G46119 Striga asiatica HOM05D004373 ORTHO05D005203 7.7e-64 247.7 251 55.4
unitig_747.g21614 Utricularia gibba HOM05D004373 ORTHO05D005203 7.7e-64 247.7 224 58.5
BcaC02g11170 Brassica carinata HOM05D004373 ORTHO05D005203 1.0e-63 247.3 124 100.0
MBI06_g08521_MAGBIO Magnolia biondii HOM05D004373 ORTHO05D005203 1.3e-63 246.9 229 57.6
CANSAT64G2747 Cannabis sativa HOM05D004373 ORTHO05D005203 2.2e-63 246.1 224 56.2
MD09G1156300 Malus domestica HOM05D004373 ORTHO05D005203 3.8e-63 245.4 224 57.6
Os06g0152300 Oryza sativa ssp. japonica HOM05D004373 ORTHO05D005203 2.5e-62 242.7 224 55.8
MELO3C019708.2 Cucumis melo HOM05D004373 ORTHO05D005203 5.5e-62 241.5 224 58.0
Manes.17G059600 Manihot esculenta HOM05D004373 ORTHO05D005203 5.5e-62 241.5 194 65.5
HanXRQChr12g0367481 Helianthus annuus HOM05D004373 ORTHO05D005203 9.4e-62 240.7 229 55.9
PSO675G5443 Papaver somniferum HOM05D004373 ORTHO05D005203 1.2e-61 240.4 224 56.2
SGA_v2.0_scaffold34G13678 Striga asiatica HOM05D004373 ORTHO05D005203 1.6e-61 240.0 194 64.4
CsaV3_6G015650 Cucumis sativus L. HOM05D004373 ORTHO05D005203 4.6e-61 238.4 224 57.6
Gorai.002G206300 Gossypium raimondii HOM05D004373 ORTHO05D005203 6.1e-61 238.0 200 65.5
PSO541G0058 Papaver somniferum HOM05D004373 ORTHO05D005203 1.4e-60 236.9 224 55.4
Zm00001eb347960 Zea mays HOM05D004373 ORTHO05D005203 1.4e-60 236.9 224 54.9
Zm00001eb376720 Zea mays HOM05D004373 ORTHO05D005203 1.4e-60 236.9 224 54.9
Lj6A610T47 Lonicera japonica HOM05D004373 ORTHO05D005203 3.9e-60 235.3 256 52.7
HPP92_000569 Vanilla planifolia HOM05D004373 ORTHO05D005203 3.9e-60 235.3 224 55.4
CDE02G2202 Ceratophyllum demersum HOM05D004373 ORTHO05D005203 1.5e-59 233.4 226 55.8
Zm00001eb348020 Zea mays HOM05D004373 ORTHO05D005203 2.0e-59 233.0 224 54.5
Hund00826 Selenicereus undatus HOM05D004373 ORTHO05D005203 2.6e-59 232.6 251 51.0
Rhsim06G0122100 Rhododendron simsii HOM05D004373 ORTHO05D005203 4.4e-59 231.9 245 52.7
Nitab4.5_0001121g0130 Nicotiana tabacum HOM05D004373 ORTHO05D005203 2.0e-56 223.0 224 53.6
vmacro12435 Vaccinium macrocarpon HOM05D004373 ORTHO05D005203 2.0e-56 223.0 185 63.8
Sabra14G0067500 Salix brachista HOM05D004373 ORTHO05D005203 4.5e-56 221.9 244 50.4
Sabra14G0069300 Salix brachista HOM05D004373 ORTHO05D005203 4.5e-56 221.9 313 43.5
ClCG02G018260 Citrullus lanatus HOM05D004373 ORTHO05D005203 6.5e-55 218.0 224 53.1
Duzib147G0031 Durio zibethinus HOM05D004373 ORTHO05D005203 3.6e-53 212.2 224 53.1
C04p19750 Brassica napus HOM05D004373 ORTHO05D005203 7.9e-53 211.1 106 100.0
BolC4t23508H Brassica oleracea HOM05D004373 ORTHO05D005203 7.9e-53 211.1 106 100.0
Gohir.D01G165850 Gossypium hirsutum HOM05D004373 ORTHO05D005203 2.3e-52 209.5 200 59.5
AagrBONN_evm.TU.Sc2ySwM_228.3026 Anthoceros agrestis HOM05D004373 ORTHO05D005203 6.7e-52 208.0 224 48.7
Sed0027414 Sechium edule HOM05D004373 ORTHO05D005203 6.7e-52 208.0 201 56.7
Pp3c16_12920 Physcomitrium patens HOM05D004373 ORTHO05D005203 8.2e-50 201.1 230 46.1
Cfa021389 Carpinus fangiana HOM05D003004 ORTHO05D003860 4.1e-49 198.7 170 61.8
Manes.16G042550 Manihot esculenta HOM05D004373 ORTHO05D005203 5.9e-48 194.9 200 54.5
SMO115G0194 Selaginella moellendorffii HOM05D004373 ORTHO05D005203 1.3e-47 193.7 202 50.5
Zm00001eb348030 Zea mays HOM05D004373 ORTHO05D005203 1.5e-43 180.3 176 56.2
Sc12g0003760 Simmondsia chinensis HOM05D004373 ORTHO05D005203 2.2e-42 176.4 164 57.9
Zm00001eb347990 Zea mays HOM05D004373 ORTHO05D005203 1.1e-41 174.1 164 56.1
PRCOL_00002744 Prasinoderma coloniale HOM05D004373 ORTHO05D005203 4.1e-41 172.2 229 41.5
Sed0000249 Sechium edule HOM05D004373 ORTHO05D005203 1.0e-39 167.5 154 58.4
Actinidia12819 Actinidia chinensis HOM05D003004 ORTHO05D005203 2.9e-39 166.0 182 52.2
CBR_g50290 Chara braunii HOM05D004373 ORTHO05D005203 6.5e-39 164.9 224 42.0
TAR626G1318 Trochodendron aralioides HOM05D004373 ORTHO05D005203 2.5e-38 162.9 122 67.2
GSVIVG01003300001 Vitis vinifera HOM05D004373 ORTHO05D005203 7.2e-38 161.4 119 67.2
MCO09G686 Micromonas commoda HOM05D004373 ORTHO05D005203 9.4e-38 161.0 241 39.8
AL283U10040 Arabidopsis lyrata HOM05D004373 ORTHO05D005203 5.7e-35 151.8 106 72.6
Gohir.A01G174700 Gossypium hirsutum HOM05D004373 ORTHO05D005203 1.3e-34 150.6 122 64.8
Zm00001eb348180 Zea mays HOM05D004373 ORTHO05D005203 2.2e-34 149.8 122 60.7
Haze_26971 Corylus avellana HOM05D004373 ORTHO05D005203 6.3e-34 148.3 224 37.9
HPP92_000565 Vanilla planifolia HOM05D004373 ORTHO05D005203 1.8e-33 146.7 126 58.7
AUR62024008 Chenopodium quinoa HOM05D004373 ORTHO05D005203 5.9e-32 141.7 104 66.3
Cre10.g423750 Chlamydomonas reinhardtii HOM05D004373 ORTHO05D005203 1.5e-30 137.1 231 38.1
C04p19740 Brassica napus HOM05D004373 ORTHO05D005203 1.9e-30 136.7 70 94.3
SGA_v2.0_scaffold425G51480 Striga asiatica HOM05D004373 ORTHO05D005203 1.4e-28 130.6 100 66.0
QL07p048830 Quercus lobata HOM05D004373 ORTHO05D005203 1.2e-24 117.5 94 64.9
QL08p043446 Quercus lobata HOM05D004373 ORTHO05D005203 1.0e-23 114.4 112 55.4
Nitab4.5_0002737g0010 Nicotiana tabacum HOM05D004373 ORTHO05D005203 1.3e-23 114.0 87 63.2
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 3.8e-23 112.5 213 33.3
GSVIVG01003298001 Vitis vinifera HOM05D004373 ORTHO05D005203 3.8e-23 112.5 83 65.1
BolC4t23507H Brassica oleracea HOM05D004373 ORTHO05D005203 3.3e-22 109.4 54 98.1
Os06g0152400 Oryza sativa ssp. japonica HOM05D004373 ORTHO05D005203 4.3e-22 109.0 154 43.5
SEGI_21332 Sequoiadendron giganteum HOM05D004373 ORTHO05D005203 4.3e-22 109.0 83 66.3
Haze_27054 Corylus avellana HOM05D004373 ORTHO05D005203 7.3e-22 108.2 181 34.3
Nitab4.5_0002737g0030 Nicotiana tabacum HOM05D004373 ORTHO05D005203 2.8e-21 106.3 82 59.8
Hund07740 Selenicereus undatus HOM05D004373 ORTHO05D005203 6.1e-21 105.1 83 62.7
Manes.12G052251 Manihot esculenta HOM05D004373 ORTHO05D005203 1.4e-20 104.0 54 85.2
Oeu051655.1 Olea europaea HOM05D004373 ORTHO05D005203 2.6e-19 99.8 54 79.6
CSS0048638 Camellia sinensis var. sinensis HOM05D004373 ORTHO05D005203 3.4e-19 99.4 56 78.6
QL08p043443 Quercus lobata HOM05D004373 ORTHO05D005203 5.7e-19 98.6 54 79.6
Mapoly0024s0082 Marchantia polymorpha HOM05D004373 ORTHO05D005203 2.0e-16 90.1 82 53.7
Zm00001eb347980 Zea mays HOM05D004373 ORTHO05D005203 4.6e-16 89.0 81 50.6
Cfa026944 Carpinus fangiana HOM05D001144 ORTHO05D125916 1.7e-15 87.0 225 28.9
SEGI_33824 Sequoiadendron giganteum HOM05D004373 ORTHO05D005203 1.4e-09 67.4 54 48.1
TAR626G1796 Trochodendron aralioides HOM05D004034 ORTHO05D004210 2.7e-08 63.2 56 53.6
CSS0011448 Camellia sinensis var. sinensis HOM05D004373 ORTHO05D005203 1.0e-07 61.2 56 51.8
Zm00001eb348170 Zea mays HOM05D004373 ORTHO05D005203 1.7e-07 60.5 56 51.8
AagrBONN_evm.TU.Sc2ySwM_117.1522 Anthoceros agrestis HOM05D002041 ORTHO05D002364 1.9e-06 57.0 96 36.5


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