Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11070 Brassica carinata HOM05D010985 ORTHO05D014960 1.3e-85 319.7 160 100.0
C04p20830 Brassica napus HOM05D010985 ORTHO05D014960 1.2e-35 153.7 82 95.1
BolC3t20672H Brassica oleracea HOM05D010985 ORTHO05D014960 1.6e-35 153.3 82 93.9
BolC4t23613H Brassica oleracea HOM05D010985 ORTHO05D014960 4.6e-35 151.8 82 93.9
C08p34900 Brassica napus HOM05D010985 ORTHO05D014960 6.0e-35 151.4 82 93.9
Sp6g02380 Schrenkiella parvula HOM05D000147 ORTHO05D001254 1.6e-27 126.7 114 63.2
Thhalv10028366m.g Eutrema salsugineum HOM05D000147 ORTHO05D001254 1.8e-26 123.2 114 62.3
A09p01930 Brassica napus HOM05D000147 ORTHO05D001254 5.6e-25 118.2 113 61.9
BraA09t35843Z Brassica rapa HOM05D000147 ORTHO05D001254 5.6e-25 118.2 113 61.9
C09p02020 Brassica napus HOM05D000147 ORTHO05D001254 7.4e-25 117.9 113 61.9
BolC9t53132H Brassica oleracea HOM05D000147 ORTHO05D001254 7.4e-25 117.9 113 61.9
BolC6t38537H Brassica oleracea HOM05D010985 ORTHO05D014960 1.6e-24 116.7 65 93.8
CARHR250770 Cardamine hirsuta HOM05D000147 ORTHO05D001254 2.1e-24 116.3 115 60.0
BcaB01g02037 Brassica carinata HOM05D000147 ORTHO05D001254 3.7e-24 115.5 113 61.1
BcaNung04060 Brassica carinata HOM05D000147 ORTHO05D001254 3.7e-24 115.5 113 61.1
BcaNung04057 Brassica carinata HOM05D000147 ORTHO05D001254 8.1e-24 114.4 113 61.1
BcaB04g19764 Brassica carinata HOM05D000147 ORTHO05D014960 5.3e-23 111.7 105 63.8
AT4G02480 Arabidopsis thaliana HOM05D000147 ORTHO05D001254 6.9e-23 111.3 116 57.8
Carub.0006s3466 Capsella rubella HOM05D000147 ORTHO05D001254 6.9e-23 111.3 115 59.1
AL6G50580 Arabidopsis lyrata HOM05D000147 ORTHO05D001254 1.5e-22 110.2 116 57.8
Aa31LG5G2110 Aethionema arabicum HOM05D000147 ORTHO05D001254 2.9e-21 105.9 115 54.8
BcaC01g06754 Brassica carinata HOM05D000147 ORTHO05D001254 1.2e-19 100.5 114 54.4
A03p31040 Brassica napus HOM05D000147 ORTHO05D001254 1.2e-19 100.5 114 54.4
C03p37830 Brassica napus HOM05D000147 ORTHO05D001254 1.2e-19 100.5 114 54.4
BolC3t16072H Brassica oleracea HOM05D000147 ORTHO05D001254 1.2e-19 100.5 114 54.4
BraA03t12281Z Brassica rapa HOM05D000147 ORTHO05D001254 1.2e-19 100.5 114 54.4
C07p03450 Brassica napus HOM05D010985 ORTHO05D014960 3.5e-19 99.0 73 76.7
Thhalv10006579m.g Eutrema salsugineum HOM05D000147 ORTHO05D001254 1.3e-18 97.1 115 52.2
Sp1g01890 Schrenkiella parvula HOM05D000147 ORTHO05D001254 1.8e-18 96.7 114 51.8
AL1G12330 Arabidopsis lyrata HOM05D000147 ORTHO05D001254 3.9e-18 95.5 115 54.8
AT1G02890 Arabidopsis thaliana HOM05D000147 ORTHO05D001254 5.1e-18 95.1 115 53.9
BraA02t07462Z Brassica rapa HOM05D000147 ORTHO05D001254 2.5e-17 92.8 112 53.6
A02p24760 Brassica napus HOM05D000147 ORTHO05D001254 1.8e-15 86.7 80 63.8
BcaC03g16129 Brassica carinata HOM05D000147 ORTHO05D001254 7.6e-14 81.3 112 49.1
BcaC05g24630 Brassica carinata HOM05D000147 ORTHO05D001254 1.3e-13 80.5 100 49.0
C05p01550 Brassica napus HOM05D000147 ORTHO05D001254 1.3e-13 80.5 100 49.0
BolC5t28934H Brassica oleracea HOM05D000147 ORTHO05D001254 1.3e-13 80.5 100 49.0
BraA10t42430Z Brassica rapa HOM05D000147 ORTHO05D001254 2.9e-13 79.3 100 48.0
A10p01550 Brassica napus HOM05D000147 ORTHO05D001254 1.4e-12 77.0 100 47.0
A07p13870 Brassica napus HOM05D010985 ORTHO05D014949 2.5e-12 76.3 66 63.6
BraA03t12563Z Brassica rapa HOM05D010985 ORTHO05D014949 2.5e-12 76.3 66 63.6
CARHR002240 Cardamine hirsuta HOM05D000147 ORTHO05D001254 2.5e-12 76.3 114 46.5
BolC2t09916H Brassica oleracea HOM05D000147 ORTHO05D001254 3.2e-12 75.9 128 44.5
BcaC05g24573 Brassica carinata HOM05D000147 ORTHO05D014960 5.5e-12 75.1 68 58.8
THA.LOC104801270 Tarenaya hassleriana HOM05D000147 ORTHO05D001254 5.5e-12 75.1 79 53.2
THA.LOC104825975 Tarenaya hassleriana HOM05D000147 ORTHO05D001254 5.5e-12 75.1 135 40.0
BraA05t22753Z Brassica rapa HOM05D010985 ORTHO05D014949 7.1e-12 74.7 66 62.1
A02p40780 Brassica napus HOM05D021362 ORTHO05D014960 1.2e-11 73.9 65 63.1
THA.LOC104815931 Tarenaya hassleriana HOM05D000147 ORTHO05D001254 4.6e-11 72.0 59 67.8
BcaB01g02461 Brassica carinata HOM05D000147 ORTHO05D001254 7.9e-11 71.2 71 59.2
BcaC07g42297 Brassica carinata HOM05D000147 ORTHO05D001254 1.3e-10 70.5 132 40.2
BraA09t42190Z Brassica rapa HOM05D000147 ORTHO05D001254 1.8e-10 70.1 80 53.8
BcaB03g15754 Brassica carinata HOM05D000147 ORTHO05D014960 1.9e-09 66.6 117 41.0
A09p68470 Brassica napus HOM05D000147 ORTHO05D001254 1.6e-08 63.5 79 49.4
BraA02t07883Z Brassica rapa HOM05D010985 ORTHO05D014960 1.4e-07 60.5 39 79.5
A02p28470 Brassica napus HOM05D005256 ORTHO05D014960 9.0e-07 57.8 36 77.8


User provided reference genes

Program Settings