Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11024 Brassica carinata HOM05D004676 ORTHO05D005661 1.7e-92 343.6 323 100.0
C04p22070 Brassica napus HOM05D004676 ORTHO05D005661 1.7e-92 343.6 323 100.0
BolC4t23730H Brassica oleracea HOM05D004676 ORTHO05D005661 1.7e-92 343.6 323 100.0
A07p19390 Brassica napus HOM05D004676 ORTHO05D005661 4.6e-74 282.3 329 90.9
AT2G28910 Arabidopsis thaliana HOM05D004676 ORTHO05D005661 3.3e-72 276.2 331 82.8
Sp4g11720 Schrenkiella parvula HOM05D004676 ORTHO05D005661 8.0e-71 271.6 336 88.1
BolC4t27336H Brassica oleracea HOM05D004676 ORTHO05D005661 2.3e-70 270.0 167 89.8
AL4G23440 Arabidopsis lyrata HOM05D004676 ORTHO05D005661 1.5e-69 267.3 334 79.9
BraA07t29644Z Brassica rapa HOM05D004676 ORTHO05D005661 7.5e-69 265.0 158 93.7
Carub.0004s0990 Capsella rubella HOM05D004676 ORTHO05D005661 2.2e-68 263.5 333 83.5
Aa31LG5G7310 Aethionema arabicum HOM05D004676 ORTHO05D005661 1.1e-67 261.2 167 84.4
BcaB02g10212 Brassica carinata HOM05D004676 ORTHO05D005661 1.2e-66 257.7 172 89.0
CARHR122080 Cardamine hirsuta HOM05D004676 ORTHO05D005661 4.6e-66 255.8 337 83.7
THA.LOC104826325 Tarenaya hassleriana HOM05D004676 ORTHO05D005661 6.0e-66 255.4 168 84.5
THA.LOC104800662 Tarenaya hassleriana HOM05D004676 ORTHO05D005661 1.1e-62 244.6 169 79.9
A04p05090 Brassica napus HOM05D004676 ORTHO05D005661 2.1e-58 230.3 167 83.8
A04p21940 Brassica napus HOM05D004676 ORTHO05D005661 2.1e-58 230.3 167 83.8
BraA04t17761Z Brassica rapa HOM05D004676 ORTHO05D005661 2.1e-58 230.3 167 83.8
BcaC02g08125 Brassica carinata HOM05D004676 ORTHO05D005661 5.1e-57 225.7 321 81.9
Ah.04g160390 Amaranthus hybridus HOM05D004676 ORTHO05D005661 1.1e-54 218.0 175 74.3
HanXRQChr01g0009481 Helianthus annuus HOM05D004676 ORTHO05D005661 5.2e-54 215.7 171 73.1
AUR62005169 Chenopodium quinoa HOM05D004676 ORTHO05D005661 6.8e-54 215.3 173 75.7
Nitab4.5_0001424g0070 Nicotiana tabacum HOM05D004676 ORTHO05D005661 8.9e-54 214.9 169 72.8
Nitab4.5_0005880g0060 Nicotiana tabacum HOM05D004676 ORTHO05D005661 8.9e-54 214.9 169 72.8
AUR62000799 Chenopodium quinoa HOM05D004676 ORTHO05D005661 1.5e-53 214.2 173 75.1
Potri.001G148000 Populus trichocarpa HOM05D004676 ORTHO05D005661 1.7e-52 210.7 173 71.1
Sc21g0005490 Simmondsia chinensis HOM05D004676 ORTHO05D005661 1.7e-52 210.7 176 73.9
Peaxi162Scf00045g00052 Petunia axillaris HOM05D004676 ORTHO05D005661 6.4e-52 208.8 170 72.4
PGSC0003DMG400018489 Solanum tuberosum HOM05D004676 ORTHO05D005661 6.4e-52 208.8 173 71.7
EL10Ac4g09397 Beta vulgaris HOM05D004676 ORTHO05D005661 8.4e-52 208.4 175 72.6
Sabra01G0116300 Salix brachista HOM05D004676 ORTHO05D005661 2.4e-51 206.8 176 63.1
Sabra01G0117800 Salix brachista HOM05D004676 ORTHO05D005661 2.4e-51 206.8 176 63.1
Manes.02G133000 Manihot esculenta HOM05D004676 ORTHO05D005661 3.2e-51 206.5 171 62.6
unitig_0.g1557 Utricularia gibba HOM05D004676 ORTHO05D005661 3.2e-51 206.5 174 70.7
Sopen08g001490 Solanum pennellii HOM05D004676 ORTHO05D005661 4.1e-51 206.1 173 70.5
Duzib168G2248 Durio zibethinus HOM05D004676 ORTHO05D005661 5.4e-51 205.7 171 71.9
Rhsim01G0227600 Rhododendron simsii HOM05D004676 ORTHO05D005661 5.4e-51 205.7 174 73.0
Solyc08g005450.3 Solanum lycopersicum HOM05D004676 ORTHO05D005661 5.4e-51 205.7 173 70.5
TAR633G1457 Trochodendron aralioides HOM05D004676 ORTHO05D005661 5.4e-51 205.7 176 70.5
Nitab4.5_0003154g0010 Nicotiana tabacum HOM05D004676 ORTHO05D005661 7.1e-51 205.3 169 71.0
SGA_v2.0_scaffold154G37155 Striga asiatica HOM05D004676 ORTHO05D005661 7.1e-51 205.3 183 67.2
RcHm_v2.0_Chr5g0064541 Rosa chinensis HOM05D004676 ORTHO05D005661 9.2e-51 204.9 175 72.0
Migut.L00671 Erythranthe guttata HOM05D004676 ORTHO05D005661 1.6e-50 204.1 179 68.2
Gohir.A07G098600 Gossypium hirsutum HOM05D004676 ORTHO05D005661 1.6e-50 204.1 171 71.3
Gohir.D07G102900 Gossypium hirsutum HOM05D004676 ORTHO05D005661 1.6e-50 204.1 171 71.3
Gorai.001G110800 Gossypium raimondii HOM05D004676 ORTHO05D005661 1.6e-50 204.1 171 71.3
Thecc.09G321600 Theobroma cacao HOM05D004676 ORTHO05D005661 2.1e-50 203.8 172 73.3
SGA_v2.0_scaffold47G17549 Striga asiatica HOM05D004676 ORTHO05D005661 2.7e-50 203.4 180 67.2
Manes.01G173800 Manihot esculenta HOM05D004676 ORTHO05D005661 3.5e-50 203.0 172 70.9
CAN.G137.34 Capsicum annuum HOM05D004676 ORTHO05D005661 6.0e-50 202.2 172 70.3
Actinidia23939 Actinidia chinensis HOM05D004676 ORTHO05D005661 7.8e-50 201.8 166 66.3
Haze_24097 Corylus avellana HOM05D004676 ORTHO05D005661 7.8e-50 201.8 171 71.3
Prupe.6G077300 Prunus persica HOM05D004676 ORTHO05D005661 7.8e-50 201.8 176 71.6
CsaV3_6G016860 Cucumis sativus L. HOM05D004676 ORTHO05D005661 1.3e-49 201.1 171 71.3
Actinidia34405 Actinidia chinensis HOM05D004676 ORTHO05D005661 2.3e-49 200.3 166 62.7
Hund18907 Selenicereus undatus HOM05D004676 ORTHO05D005661 3.0e-49 199.9 176 69.9
unitig_747.g22032 Utricularia gibba HOM05D004676 ORTHO05D005661 3.0e-49 199.9 174 69.0
MELO3C025917.2 Cucumis melo HOM05D004676 ORTHO05D005661 3.9e-49 199.5 171 70.8
Cpa.g.sc81.149 Carica papaya HOM05D004676 ORTHO05D005661 5.1e-49 199.1 173 69.9
Dinv12426 Davidia involucrata HOM05D004676 ORTHO05D005661 5.1e-49 199.1 175 68.6
Nn1g00565 Nelumbo nucifera HOM05D004676 ORTHO05D005661 5.1e-49 199.1 177 66.7
FAN11G0391 Fragaria x ananassa HOM05D004676 ORTHO05D005661 6.6e-49 198.7 176 68.8
FAN25G1996 Fragaria x ananassa HOM05D004676 ORTHO05D005661 6.6e-49 198.7 176 68.8
Cpa.g.sc161.42 Carica papaya HOM05D004676 ORTHO05D005661 8.7e-49 198.4 172 69.2
Hma1.2p1_0418F.1_g149200 Hydrangea macrophylla HOM05D004676 ORTHO05D005661 8.7e-49 198.4 180 69.4
vmacro05212 Vaccinium macrocarpon HOM05D004676 ORTHO05D005661 8.7e-49 198.4 144 72.9
Migut.L00698 Erythranthe guttata HOM05D004676 ORTHO05D005661 1.1e-48 198.0 180 67.8
FvH4_3g36111 Fragaria vesca HOM05D004676 ORTHO05D005661 1.1e-48 198.0 176 69.3
Lsat_1_v5_gn_5_170600 Lactuca sativa HOM05D004676 ORTHO05D005661 1.1e-48 198.0 137 73.7
Lj1P153T22 Lonicera japonica HOM05D004676 ORTHO05D005661 1.5e-48 197.6 145 69.7
Cc01_g12890 Coffea canephora HOM05D004676 ORTHO05D005661 1.9e-48 197.2 185 66.5
Oeu019194.1 Olea europaea HOM05D004676 ORTHO05D005661 3.3e-48 196.4 177 68.4
FAN16G2805 Fragaria x ananassa HOM05D004676 ORTHO05D005661 5.6e-48 195.7 176 68.2
Oeu051436.2 Olea europaea HOM05D004676 ORTHO05D005661 7.3e-48 195.3 179 69.3
CiPaw.13G094200 Carya illinoinensis HOM05D004676 ORTHO05D005661 9.6e-48 194.9 176 69.3
Haze_12047 Corylus avellana HOM05D004676 ORTHO05D005661 9.6e-48 194.9 173 70.5
Eucgr.E01963 Eucalyptus grandis HOM05D004676 ORTHO05D005661 1.2e-47 194.5 177 67.8
SHI01165 Sapria himalayana HOM05D004676 ORTHO05D005661 2.1e-47 193.7 173 61.3
Atru.chr3.3906 Acer truncatum HOM05D004676 ORTHO05D005661 4.7e-47 192.6 177 70.6
FAN21G2159 Fragaria x ananassa HOM05D004676 ORTHO05D005661 4.7e-47 192.6 178 67.4
MD03G1093300 Malus domestica HOM05D004676 ORTHO05D005661 4.7e-47 192.6 178 68.5
QL09p008735 Quercus lobata HOM05D004676 ORTHO05D005661 6.2e-47 192.2 135 70.4
Cfa011505 Carpinus fangiana HOM05D004676 ORTHO05D005661 1.4e-46 191.0 172 67.4
ECA248G3797 Erigeron canadensis HOM05D004676 ORTHO05D005661 2.4e-46 190.3 171 66.1
Migut.D02100 Erythranthe guttata HOM05D004676 ORTHO05D005661 2.4e-46 190.3 178 65.2
TAR100G0004 Trochodendron aralioides HOM05D004676 ORTHO05D005661 4.0e-46 189.5 177 65.0
ClCG02G020150 Citrullus lanatus HOM05D004676 ORTHO05D005661 5.2e-46 189.1 135 69.6
Ciclev10028807m.g Citrus clementina HOM05D004676 ORTHO05D005661 5.2e-46 189.1 177 66.1
Aqoxy7G03598 Aquilegia oxysepala HOM05D004676 ORTHO05D005661 9.0e-46 188.3 132 70.5
MD11G1108100 Malus domestica HOM05D004676 ORTHO05D005661 1.5e-45 187.6 177 66.7
MBI14_g16284_MAGBIO Magnolia biondii HOM05D004676 ORTHO05D005661 2.0e-45 187.2 174 68.4
CiPaw.14G068300 Carya illinoinensis HOM05D004676 ORTHO05D005661 2.6e-45 186.8 145 68.3
C04p58100 Brassica napus HOM05D004676 ORTHO05D005661 5.8e-45 185.7 321 77.9
Eucgr.E01882 Eucalyptus grandis HOM05D004676 ORTHO05D005661 1.3e-44 184.5 140 67.9
HPP92_003389 Vanilla planifolia HOM05D004676 ORTHO05D005661 1.7e-44 184.1 174 65.5
SEGI_40255 Sequoiadendron giganteum HOM05D004676 ORTHO05D005661 2.9e-44 183.3 180 58.3
Phvul.007G016200 Phaseolus vulgaris HOM05D004676 ORTHO05D005661 3.8e-44 183.0 172 63.4
PGR119G2251 Punica granatum HOM05D004676 ORTHO05D005661 3.8e-44 183.0 180 66.1
RcHm_v2.0_Chr5g0064551 Rosa chinensis HOM05D004676 ORTHO05D005661 3.8e-44 183.0 170 64.1
Thecc.09G321800 Theobroma cacao HOM05D004676 ORTHO05D005661 3.8e-44 183.0 171 66.7
TAR677G0002 Trochodendron aralioides HOM05D004676 ORTHO05D005661 6.4e-44 182.2 173 63.0
ECA233G5350 Erigeron canadensis HOM05D004676 ORTHO05D005661 8.4e-44 181.8 172 65.7
DCAR_025381 Daucus carota HOM05D004676 ORTHO05D005661 1.1e-43 181.4 146 65.1
Sed0011846 Sechium edule HOM05D004676 ORTHO05D005661 1.1e-43 181.4 175 65.7
TAR588G0001 Trochodendron aralioides HOM05D004676 ORTHO05D005661 1.1e-43 181.4 134 67.9
PSO151G0082 Papaver somniferum HOM05D004676 ORTHO05D005661 2.4e-43 180.3 177 65.5
CDE07G0255 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 4.2e-43 179.5 172 64.0
PSO339G5531 Papaver somniferum HOM05D004676 ORTHO05D005661 4.2e-43 179.5 177 65.5
TWI75G1679 Tripterygium wilfordii HOM05D004676 ORTHO05D005661 4.2e-43 179.5 134 67.9
TWI79G0464 Tripterygium wilfordii HOM05D004676 ORTHO05D005661 5.4e-43 179.1 175 64.0
CANSAT21G2535 Cannabis sativa HOM05D004676 ORTHO05D005661 7.1e-43 178.7 177 63.8
CDE04G1893 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 7.1e-43 178.7 169 62.7
VMungo0720G1898 Vigna mungo HOM05D004676 ORTHO05D005661 2.1e-42 177.2 172 64.0
Glyma.20G104700 Glycine max HOM05D004676 ORTHO05D005661 3.5e-42 176.4 173 62.4
Mapoly0006s0051 Marchantia polymorpha HOM05D004676 ORTHO05D005661 1.7e-41 174.1 177 59.9
Glyma.10G284600 Glycine max HOM05D004676 ORTHO05D005661 2.3e-41 173.7 171 61.4
ATR0733G034 Amborella trichopoda HOM05D004676 ORTHO05D005661 3.0e-41 173.3 139 66.9
TPR.G18864 Trifolium pratense HOM05D004676 ORTHO05D005661 3.0e-41 173.3 173 61.8
Lj5g0019317 Lotus japonicus HOM05D004676 ORTHO05D005661 3.9e-41 172.9 184 54.3
arahy.Tifrunner.gnm1.ann1.ID2MIU Arachis hypogaea HOM05D004676 ORTHO05D005661 5.1e-41 172.6 176 59.7
Ca_11220_v3 Cicer arietinum L. HOM05D004676 ORTHO05D005661 5.1e-41 172.6 172 61.6
Lalb_Chr02g0143571 Lupinus albus HOM05D004676 ORTHO05D005661 2.5e-40 170.2 172 59.9
Lalb_Chr06g0163861 Lupinus albus HOM05D004676 ORTHO05D005661 5.6e-40 169.1 173 57.2
Psat0s2898g0040 Pisum sativum HOM05D004676 ORTHO05D005661 5.6e-40 169.1 172 63.4
Eucgr.J02052 Eucalyptus grandis HOM05D004676 ORTHO05D005661 1.6e-39 167.5 179 60.9
Pp3c8_12040 Physcomitrium patens HOM05D004676 ORTHO05D005661 1.6e-39 167.5 179 53.6
TAR383G0008 Trochodendron aralioides HOM05D004676 ORTHO05D005661 2.1e-39 167.2 111 74.8
TAR455G0002 Trochodendron aralioides HOM05D004676 ORTHO05D005661 2.1e-39 167.2 111 74.8
DCAR_024536 Daucus carota HOM05D004676 ORTHO05D005661 2.8e-39 166.8 123 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4612 Anthoceros agrestis HOM05D004676 ORTHO05D005661 8.1e-39 165.2 175 61.1
FAN11G1736 Fragaria x ananassa HOM05D002246 ORTHO05D002308 8.1e-39 165.2 171 60.2
RcHm_v2.0_Chr5g0064841 Rosa chinensis HOM05D004676 ORTHO05D005661 1.4e-38 164.5 136 61.8
BraA07t30700Z Brassica rapa HOM05D004676 ORTHO05D005661 2.4e-38 163.7 87 92.0
FvH4_3g36120 Fragaria vesca HOM05D002246 ORTHO05D002308 2.4e-38 163.7 171 57.9
Ca_09918_v3 Cicer arietinum L. HOM05D004676 ORTHO05D005661 3.1e-38 163.3 141 59.6
Os09g0103700 Oryza sativa ssp. japonica HOM05D004676 ORTHO05D005661 2.0e-37 160.6 207 53.1
COL.COLO4_18509 Corchorus olitorius HOM05D004676 ORTHO05D005661 8.4e-36 155.2 144 61.1
Zm00001eb307410 Zea mays HOM05D004676 ORTHO05D005661 1.1e-35 154.8 130 62.3
Zm00001eb095710 Zea mays HOM05D004676 ORTHO05D005661 1.4e-35 154.5 130 62.3
Os05g0297400 Oryza sativa ssp. japonica HOM05D004676 ORTHO05D005661 2.3e-33 147.1 185 48.6
SMO117G0168 Selaginella moellendorffii HOM05D004676 ORTHO05D005661 1.9e-32 144.1 126 61.9
ECA233G0785 Erigeron canadensis HOM05D004676 ORTHO05D005661 5.8e-29 132.5 96 71.9
CBR_g53496 Chara braunii HOM05D004676 ORTHO05D137281 3.8e-28 129.8 96 64.6
ECA233G0017 Erigeron canadensis HOM05D004676 ORTHO05D005661 5.5e-27 125.9 96 70.8
ATR0693G379 Amborella trichopoda HOM05D004676 ORTHO05D005661 3.0e-25 120.2 177 54.2
HPP92_003385 Vanilla planifolia HOM05D004676 ORTHO05D005661 8.2e-23 112.1 125 60.0
Eucgr.E01961 Eucalyptus grandis HOM05D004676 ORTHO05D005661 2.6e-21 107.1 118 61.9
RcHm_v2.0_Chr5g0064811 Rosa chinensis HOM05D004676 ORTHO05D005661 2.2e-20 104.0 171 48.5
TAR625G0807 Trochodendron aralioides HOM05D004676 ORTHO05D005661 3.5e-18 96.7 64 73.4
MD11G1107700 Malus domestica HOM05D004676 ORTHO05D005661 4.3e-16 89.7 73 65.8
ECA247G4102 Erigeron canadensis HOM05D004676 ORTHO05D005661 9.7e-16 88.6 97 54.6
Dinv42954 Davidia involucrata HOM05D004736 ORTHO05D006424 2.2e-15 87.4 51 80.4
Dinv43146 Davidia involucrata HOM05D004736 ORTHO05D006424 2.2e-15 87.4 51 80.4
ECA233G4946 Erigeron canadensis HOM05D004676 ORTHO05D005661 6.3e-15 85.9 172 45.3
ECA233G2734 Erigeron canadensis HOM05D004676 ORTHO05D005661 2.9e-12 77.0 43 86.0
SEGI_06382 Sequoiadendron giganteum HOM05D004676 ORTHO05D005661 6.7e-09 65.9 39 74.4
Cre09.g389652 Chlamydomonas reinhardtii HOM05D004676 ORTHO05D005661 4.1e-06 56.6 120 32.5


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