Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10996 Brassica carinata HOM05D011584 ORTHO05D016702 2.4e-107 392.1 187 100.0
BcaB02g11219 Brassica carinata HOM05D011584 ORTHO05D016702 3.6e-79 298.5 201 74.6
C04p22370 Brassica napus HOM05D001379 ORTHO05D000199 2.0e-58 229.6 154 77.9
BcaB08g35295 Brassica carinata HOM05D011584 ORTHO05D000199 4.5e-50 201.8 141 72.3
BcaC03g16253 Brassica carinata HOM05D011584 ORTHO05D016702 5.0e-49 198.4 124 79.0
BcaC09g49779 Brassica carinata HOM05D011584 ORTHO05D016702 2.6e-45 186.0 193 55.4
BolC2t10066H Brassica oleracea HOM05D011584 ORTHO05D016702 4.4e-45 185.3 188 55.9
BcaC03g16252 Brassica carinata HOM05D011584 ORTHO05D016702 7.5e-45 184.5 203 52.7
C02p42380 Brassica napus HOM05D011584 ORTHO05D016702 2.0e-42 176.4 190 51.6
BcaB05g23428 Brassica carinata HOM05D011584 ORTHO05D091061 3.3e-40 169.1 156 61.5
A02p27360 Brassica napus HOM05D011584 ORTHO05D016702 8.0e-39 164.5 183 53.6
BraA02t07764Z Brassica rapa HOM05D011584 ORTHO05D016702 8.0e-39 164.5 183 53.6
BolC1t03241H Brassica oleracea HOM05D011584 ORTHO05D016702 6.0e-26 121.7 66 81.8
Thhalv10006392m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.3e-17 93.2 176 35.2
Carub.0002s1270 Capsella rubella HOM05D000390 ORTHO05D001192 4.9e-12 75.5 144 27.1
Carub.0002s1266 Capsella rubella HOM05D000390 ORTHO05D001192 1.3e-09 67.4 183 26.8
THA.LOC104825614 Tarenaya hassleriana HOM05D000390 ORTHO05D001192 1.3e-09 67.4 142 30.3
THA.LOC104822444 Tarenaya hassleriana HOM05D000390 ORTHO05D001192 2.3e-09 66.6 138 33.3
Carub.0002s1264 Capsella rubella HOM05D000390 ORTHO05D001192 5.1e-09 65.5 162 27.2
Sp5g21605 Schrenkiella parvula HOM05D000390 ORTHO05D001192 8.6e-09 64.7 158 29.1
Carub.0005s1231 Capsella rubella HOM05D000390 ORTHO05D001192 1.1e-08 64.3 161 27.3
AL7G53030 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.2e-07 60.8 189 25.9
Carub.0007s3308 Capsella rubella HOM05D000390 ORTHO05D001192 1.1e-06 57.8 156 26.3
AL7G53060 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 4.0e-06 55.8 138 28.3
BcaB02g08022 Brassica carinata HOM05D000390 ORTHO05D001192 4.0e-06 55.8 126 27.8
A04p19380 Brassica napus HOM05D000390 ORTHO05D018654 8.9e-06 54.7 136 30.1
CARHR058650 Cardamine hirsuta HOM05D000390 ORTHO05D001192 8.9e-06 54.7 87 26.4
Thhalv10027866m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 8.9e-06 54.7 150 28.0


User provided reference genes

Program Settings