Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10927 Brassica carinata HOM05D009123 ORTHO05D011699 1.8e-87 325.9 166 100.0
C04p23580 Brassica napus HOM05D009123 ORTHO05D011699 1.8e-87 325.9 166 100.0
A07p18490 Brassica napus HOM05D009123 ORTHO05D011699 5.6e-84 314.3 166 96.4
BraA07t29565Z Brassica rapa HOM05D009123 ORTHO05D011699 5.6e-84 314.3 166 96.4
BcaB02g10130 Brassica carinata HOM05D009123 ORTHO05D011699 1.3e-61 240.0 166 75.3
BcaB05g21892 Brassica carinata HOM05D009123 ORTHO05D011699 5.3e-34 148.3 154 52.6
Thhalv10014916m.g Eutrema salsugineum HOM05D009123 ORTHO05D011699 3.8e-32 142.1 163 50.3
BcaC03g13061 Brassica carinata HOM05D009123 ORTHO05D011699 2.8e-27 125.9 154 46.8
C02p00340 Brassica napus HOM05D009123 ORTHO05D011699 2.8e-27 125.9 154 46.8
BolC4t24290H Brassica oleracea HOM05D009123 ORTHO05D011699 3.7e-27 125.6 162 45.1
BraA02t04707Z Brassica rapa HOM05D009123 ORTHO05D011699 3.7e-27 125.6 155 47.1
BcaB04g18529 Brassica carinata HOM05D009123 ORTHO05D011699 4.8e-27 125.2 171 46.8
A03p67140 Brassica napus HOM05D009123 ORTHO05D011699 4.8e-27 125.2 162 45.1
BolC2t06034H Brassica oleracea HOM05D009123 ORTHO05D011699 1.8e-26 123.2 154 46.8
BcaC01g00598 Brassica carinata HOM05D009123 ORTHO05D011699 1.2e-25 120.6 170 45.9
A08p14150 Brassica napus HOM05D009123 ORTHO05D011699 1.2e-25 120.6 170 45.9
C03p81730 Brassica napus HOM05D009123 ORTHO05D011699 5.8e-25 118.2 170 45.9
BolC3t20444H Brassica oleracea HOM05D009123 ORTHO05D011699 5.8e-25 118.2 170 45.9
BraA08t33409Z Brassica rapa HOM05D009123 ORTHO05D011699 6.1e-22 108.2 146 45.9
AL6G35100 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 2.3e-21 106.3 163 46.0
Carub.0004s0766 Capsella rubella HOM05D009123 ORTHO05D011699 3.9e-21 105.5 170 43.5
CARHR119510 Cardamine hirsuta HOM05D009123 ORTHO05D011699 1.9e-20 103.2 153 47.7
Sp6g40410 Schrenkiella parvula HOM05D009123 ORTHO05D011699 3.3e-20 102.4 162 39.5
C04p27520 Brassica napus HOM05D009123 ORTHO05D011699 4.3e-20 102.1 103 52.4
AT5G23820 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 2.8e-19 99.4 151 47.7
BraA01t02761Z Brassica rapa HOM05D009123 ORTHO05D011699 2.8e-19 99.4 103 52.4
AT5G23840 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 1.4e-18 97.1 160 43.8
Carub.0003s2749 Capsella rubella HOM05D009123 ORTHO05D038737 1.4e-15 87.0 165 39.4
AT2G26370 Arabidopsis thaliana HOM05D009123 ORTHO05D038737 9.4e-15 84.3 174 36.8
AT5G23830 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 3.6e-14 82.4 160 40.6
BcaC02g07810 Brassica carinata HOM05D030909 ORTHO05D027123 1.8e-10 70.1 106 41.5
AT1G45015 Arabidopsis thaliana HOM05D009123 ORTHO05D019748 4.1e-10 68.9 158 32.9
BcaB06g28710 Brassica carinata HOM05D030909 ORTHO05D027123 5.3e-10 68.6 106 41.5
AL6G35080 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 6.9e-10 68.2 67 58.2
Thhalv10003282m.g Eutrema salsugineum HOM05D009123 ORTHO05D019748 1.5e-09 67.0 171 34.5
C03p20560 Brassica napus HOM05D025788 ORTHO05D019748 3.4e-09 65.9 145 33.1
Thhalv10029005m.g Eutrema salsugineum HOM05D009123 ORTHO05D195657 8.5e-08 61.2 164 32.3
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 1.9e-07 60.1 93 40.9
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 4.2e-07 58.9 156 32.1
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 5.5e-07 58.5 147 34.0
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 9.4e-07 57.8 93 39.8
THA.LOC104810941 Tarenaya hassleriana HOM05D002139 ORTHO05D002264 9.4e-07 57.8 85 37.6
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 1.6e-06 57.0 93 39.8
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 6.1e-06 55.1 93 37.6


User provided reference genes

Program Settings