Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.8e-221 772.3 390 100.0
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.8e-221 772.3 390 100.0
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 9.6e-220 766.5 390 99.0
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.9e-216 755.0 390 97.9
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.9e-216 755.0 390 97.9
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.3e-208 729.6 393 95.4
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 9.7e-204 713.4 391 92.8
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 4.6e-198 694.5 398 88.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.8e-197 692.6 384 90.4
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.5e-196 688.7 386 89.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.8e-195 685.3 384 89.8
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 4.7e-190 667.9 384 87.0
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 4.5e-177 624.8 391 79.3
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 5.0e-176 621.3 441 73.0
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.8e-162 576.2 335 82.7
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.1e-162 575.5 371 77.4
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 7.7e-161 570.9 348 79.3
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.0e-160 570.5 347 78.1
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.3e-160 569.3 369 75.3
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.8e-160 568.5 369 75.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.5e-159 566.6 331 81.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 2.5e-159 565.8 339 78.2
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 4.2e-159 565.1 387 73.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 7.2e-159 564.3 372 74.7
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 9.5e-159 563.9 331 81.0
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.2e-158 563.5 392 72.2
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.6e-158 563.1 372 74.5
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 2.1e-158 562.8 348 78.2
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 3.6e-158 562.0 386 71.8
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.8e-157 559.7 334 79.3
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.8e-157 559.7 331 79.2
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 2.3e-157 559.3 345 77.7
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.3e-157 559.3 379 73.1
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.0e-157 558.9 355 76.3
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 3.0e-157 558.9 335 79.7
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.0e-157 558.9 360 76.1
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 6.8e-157 557.8 354 74.0
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.2e-156 557.0 359 76.0
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 2.0e-156 556.2 348 77.6
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 2.0e-156 556.2 341 77.4
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.6e-156 555.8 355 76.1
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.6e-156 555.8 356 75.8
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.4e-156 555.4 359 76.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 3.4e-156 555.4 376 72.9
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 4.4e-156 555.1 339 77.3
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 5.7e-156 554.7 374 71.7
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 5.7e-156 554.7 351 77.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 5.7e-156 554.7 333 79.3
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 7.5e-156 554.3 337 78.6
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 7.5e-156 554.3 345 76.5
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 7.5e-156 554.3 379 72.3
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.3e-155 553.5 373 71.8
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.3e-155 553.5 338 76.9
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.7e-155 553.1 339 79.4
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.7e-155 553.1 361 74.5
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.8e-155 552.4 343 76.7
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.8e-155 552.4 387 71.6
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.8e-155 552.4 378 72.2
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.7e-155 552.0 335 77.9
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 3.7e-155 552.0 338 76.6
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.7e-155 552.0 331 78.2
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 3.7e-155 552.0 379 72.6
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 4.9e-155 551.6 337 76.6
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 6.3e-155 551.2 339 75.8
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.3e-155 551.2 350 75.1
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 8.3e-155 550.8 347 76.1
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.4e-154 550.1 342 76.3
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.8e-154 549.7 333 78.4
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.4e-154 549.3 374 72.5
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 7.0e-154 547.7 351 74.6
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.0e-153 546.2 345 76.5
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 3.5e-153 545.4 374 72.5
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 4.6e-153 545.0 365 73.7
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 4.6e-153 545.0 372 71.8
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 1.3e-152 543.5 340 75.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.7e-152 543.1 367 72.2
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.3e-152 542.7 368 72.6
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.9e-152 542.0 365 72.1
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 6.6e-152 541.2 365 72.9
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 8.6e-152 540.8 340 75.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.1e-151 540.4 351 74.1
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.3e-151 538.9 330 77.0
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.3e-151 538.5 352 73.6
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.2e-150 537.0 349 73.6
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.2e-150 537.0 347 73.5
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.0e-149 533.9 424 64.4
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.6e-148 529.3 334 75.1
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 3.4e-148 528.9 335 74.9
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 4.4e-148 528.5 387 69.5
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 4.9e-147 525.0 370 71.4
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 4.1e-146 521.9 334 73.1
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.0e-145 519.6 363 70.5
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.0e-144 517.3 305 79.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 6.2e-142 508.1 405 64.0
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.2e-141 505.0 334 74.0
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.0e-140 503.1 299 80.9
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 4.9e-139 498.4 347 70.6
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.1e-135 487.3 341 71.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.5e-135 486.9 305 74.8
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.8e-134 482.6 328 72.3
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.1e-133 480.7 372 65.3
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 2.9e-131 472.6 318 75.2
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.9e-130 469.9 349 66.8
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 2.5e-127 459.5 332 66.0
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.8e-126 456.1 324 63.9
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.1e-125 454.1 341 63.3
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.0e-120 436.0 321 64.5
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 3.1e-117 426.0 293 72.4
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 9.0e-109 397.9 327 61.5
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.5e-108 397.1 285 66.3
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 2.1e-102 376.7 246 76.8
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 9.7e-87 324.7 296 54.4
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 8.5e-83 311.6 294 52.7
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.7e-78 297.4 303 49.2
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 2.8e-78 296.6 291 55.0
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.7e-72 275.4 182 73.6
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.7e-64 248.8 181 70.7
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.1e-53 211.8 180 59.4
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.3e-48 197.2 130 67.7
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 3.3e-42 176.8 113 77.9
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.1e-32 143.7 102 67.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.4e-23 113.6 103 54.4
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.6e-20 104.8 65 70.8
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 6.0e-20 102.8 157 38.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.7e-19 101.3 106 50.9
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.8e-17 94.0 96 51.0
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.4e-15 87.0 55 69.1


User provided reference genes

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