Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 3.0e-60 235.0 117 100.0
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 2.0e-59 232.3 117 99.1
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 2.0e-59 232.3 117 99.1
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 8.0e-45 183.7 110 87.3
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 4.0e-44 181.4 110 86.4
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 6.8e-44 180.6 110 86.4
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 6.8e-44 180.6 110 86.4
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 8.8e-44 180.3 110 85.5
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 1.5e-43 179.5 110 84.5
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 1.5e-43 179.5 110 84.5
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 1.5e-43 179.5 110 84.5
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 1.5e-43 179.5 110 84.5
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 1.5e-43 179.5 110 84.5
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 2.0e-43 179.1 110 84.5
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 2.0e-43 179.1 110 84.5
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 2.0e-43 179.1 110 84.5
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 2.0e-43 179.1 110 84.5
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 2.0e-43 179.1 110 84.5
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.0e-43 179.1 110 84.5
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 2.6e-43 178.7 110 84.5
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.4e-43 177.9 110 84.5
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 1.3e-42 176.4 110 83.6
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.6e-40 169.5 114 74.6
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 2.9e-39 165.2 110 78.2
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 3.8e-39 164.9 110 75.5
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.8e-39 164.9 110 77.3
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 5.0e-39 164.5 110 78.2
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 6.6e-39 164.1 110 76.4
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 6.6e-39 164.1 110 76.4
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 6.6e-39 164.1 110 76.4
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 6.6e-39 164.1 110 76.4
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 8.6e-39 163.7 110 74.5
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 8.6e-39 163.7 110 76.4
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-38 163.3 110 76.4
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-38 163.3 110 76.4
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-38 163.3 110 76.4
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-38 163.3 110 76.4
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.5e-38 162.9 110 76.4
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.9e-38 162.5 110 74.5
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.9e-38 162.5 110 77.3
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.9e-38 162.5 110 77.3
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 2.5e-38 162.2 110 76.4
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 3.3e-38 161.8 110 77.3
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.3e-38 161.8 110 75.5
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 4.2e-38 161.4 110 73.6
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 5.5e-38 161.0 110 74.5
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 5.5e-38 161.0 110 75.5
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.5e-38 161.0 110 75.5
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 7.2e-38 160.6 110 75.5
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 9.5e-38 160.2 110 74.5
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 9.5e-38 160.2 110 72.7
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 1.2e-37 159.8 110 77.3
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 1.2e-37 159.8 110 72.7
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 1.6e-37 159.5 110 73.6
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.6e-37 159.5 110 73.6
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.6e-37 159.5 110 73.6
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 2.1e-37 159.1 110 73.6
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 2.1e-37 159.1 110 73.6
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 2.1e-37 159.1 110 73.6
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.8e-37 158.7 111 72.1
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 2.8e-37 158.7 116 69.0
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 73.6
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 76.4
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 73.6
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 73.6
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 77.3
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 74.5
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 3.6e-37 158.3 110 71.8
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 4.7e-37 157.9 110 75.5
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 4.7e-37 157.9 110 71.8
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 6.1e-37 157.5 110 72.7
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 6.1e-37 157.5 110 73.6
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 6.1e-37 157.5 110 73.6
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 6.1e-37 157.5 110 72.7
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 8.0e-37 157.1 110 77.3
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 8.0e-37 157.1 110 77.3
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 8.0e-37 157.1 110 75.5
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.0e-36 156.8 110 70.9
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.0e-36 156.8 110 73.6
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 1.4e-36 156.4 110 73.6
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 1.8e-36 156.0 110 70.9
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.8e-36 156.0 110 76.4
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.8e-36 156.0 110 71.8
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 2.3e-36 155.6 110 70.0
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 2.3e-36 155.6 110 76.4
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 2.3e-36 155.6 110 70.9
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 3.0e-36 155.2 110 70.0
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 3.0e-36 155.2 110 74.5
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 3.0e-36 155.2 110 72.7
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 4.0e-36 154.8 110 70.9
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 4.0e-36 154.8 110 71.8
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 4.0e-36 154.8 111 71.2
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 5.2e-36 154.5 110 71.8
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 5.2e-36 154.5 110 74.5
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 5.2e-36 154.5 110 70.0
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 5.2e-36 154.5 110 73.6
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 6.8e-36 154.1 110 71.8
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 6.8e-36 154.1 110 71.8
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 6.8e-36 154.1 114 70.2
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 8.9e-36 153.7 110 70.9
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 8.9e-36 153.7 110 69.1
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 8.9e-36 153.7 110 74.5
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 8.9e-36 153.7 110 69.1
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 1.2e-35 153.3 110 70.9
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.5e-35 152.9 110 73.6
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 1.5e-35 152.9 110 71.8
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 2.6e-35 152.1 110 69.1
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 2.6e-35 152.1 110 71.8
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 2.6e-35 152.1 110 70.0
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 2.6e-35 152.1 110 70.0
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 2.6e-35 152.1 110 72.7
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 5.7e-35 151.0 110 67.3
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 7.5e-35 150.6 110 69.1
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 7.5e-35 150.6 110 74.5
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 7.5e-35 150.6 110 70.0
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 1.3e-34 149.8 110 71.8
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 1.7e-34 149.4 110 68.2
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 2.2e-34 149.1 110 70.0
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 3.7e-34 148.3 110 68.2
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 3.7e-34 148.3 110 68.2
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 3.1e-33 145.2 110 73.6
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 3.1e-33 145.2 107 70.1
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 3.1e-33 145.2 134 61.2
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 4.1e-33 144.8 110 70.9
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 2.7e-32 142.1 110 68.2
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.2e-29 133.3 107 66.4
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 8.9e-28 127.1 150 50.0
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 2.0e-27 125.9 114 60.5
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 5.8e-27 124.4 110 62.7
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 5.8e-27 124.4 101 65.3
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 3.7e-26 121.7 121 57.0
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 2.4e-25 119.0 110 55.5
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.6e-24 116.3 131 48.9
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.3e-23 113.2 85 72.9
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 5.0e-23 111.3 203 36.9
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 1.5e-22 109.8 110 54.5
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 4.3e-22 108.2 86 64.0
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 1.6e-21 106.3 126 54.0
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.6e-21 105.1 85 67.1
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.7e-21 104.8 83 69.9
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.2e-21 104.4 81 70.4
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 6.2e-21 104.4 84 70.2
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.8e-20 102.8 81 67.9
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.8e-20 102.8 81 70.4
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 1.8e-20 102.8 81 70.4
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 3.1e-20 102.1 74 75.7
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 4.0e-20 101.7 81 66.7
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.0e-20 101.7 81 69.1
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.2e-19 100.1 83 65.1
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 1.5e-19 99.8 70 70.0
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.6e-19 99.0 77 70.1
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 2.6e-19 99.0 87 63.2
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 9.8e-19 97.1 57 80.7
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 1.7e-18 96.3 101 57.4
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.9e-18 95.5 57 78.9
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.7e-18 95.1 77 64.9
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 8.3e-18 94.0 57 77.2
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 9.2e-17 90.5 81 64.2
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 1.2e-16 90.1 112 42.0
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 2.1e-16 89.4 85 58.8
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 4.6e-16 88.2 57 71.9
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 4.6e-16 88.2 81 63.0
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.8e-16 87.4 101 48.5
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 8.6e-15 84.0 73 64.4
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 1.9e-14 82.8 72 63.9
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.2e-11 73.6 65 60.0
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 2.0e-11 72.8 104 41.3
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.5e-11 70.9 63 58.7
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.9e-10 68.9 44 75.0
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 9.2e-09 63.9 114 35.1


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