Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10749 Brassica carinata HOM05D056343 ORTHO05D095405 1.4e-35 152.5 84 100.0
BcaC02g10751 Brassica carinata HOM05D056343 ORTHO05D091129 1.4e-35 152.5 84 100.0
A03p50980 Brassica napus HOM05D000305 ORTHO05D000065 6.6e-17 90.5 60 83.3
A07p02170 Brassica napus HOM05D000305 ORTHO05D000065 2.5e-16 88.6 59 83.1
A08p13250 Brassica napus HOM05D000305 ORTHO05D000065 2.5e-16 88.6 59 83.1
BcaC02g11930 Brassica carinata HOM05D000305 ORTHO05D000065 7.3e-16 87.0 60 81.7
BolC4t22586H Brassica oleracea HOM05D000305 ORTHO05D000065 7.3e-16 87.0 60 81.7
BcaC03g15077 Brassica carinata HOM05D000305 ORTHO05D000065 1.6e-15 85.9 60 81.7
BolC1t01571H Brassica oleracea HOM05D000305 ORTHO05D000065 3.6e-15 84.7 60 75.0
C04p09770 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-14 82.8 59 79.7
C03p57740 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-13 79.7 53 77.4
BolC3t18048H Brassica oleracea HOM05D000305 ORTHO05D000065 1.5e-13 79.3 52 78.8
C01p16150 Brassica napus HOM05D000305 ORTHO05D000065 6.4e-12 73.9 51 78.4
BcaC02g10769 Brassica carinata HOM05D000305 ORTHO05D040050 6.0e-10 67.4 89 48.3
BcaC03g15089 Brassica carinata HOM05D000305 ORTHO05D000065 6.6e-09 63.9 61 55.7
BcaC03g15192 Brassica carinata HOM05D000305 ORTHO05D000065 6.6e-09 63.9 61 55.7
BolC3t16220H Brassica oleracea HOM05D000305 ORTHO05D040050 1.9e-08 62.4 40 85.0
BolC6t35545H Brassica oleracea HOM05D000305 ORTHO05D000065 1.9e-08 62.4 91 45.1
BolC7t42178H Brassica oleracea HOM05D000305 ORTHO05D000065 2.5e-08 62.0 91 40.7
C05p45750 Brassica napus HOM05D000305 ORTHO05D000065 4.3e-08 61.2 91 44.0
A06p37520 Brassica napus HOM05D001342 ORTHO05D001286 7.3e-08 60.5 87 46.0
BraA06t26674Z Brassica rapa HOM05D001342 ORTHO05D001286 7.3e-08 60.5 87 46.0
BcaB05g23657 Brassica carinata HOM05D000305 ORTHO05D000065 9.6e-08 60.1 56 55.4
C04p25430 Brassica napus HOM05D000305 ORTHO05D000065 1.6e-07 59.3 88 45.5
BolC4t24062H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-07 59.3 88 45.5
BcaB02g10965 Brassica carinata HOM05D000305 ORTHO05D000065 2.8e-07 58.5 59 52.5
BolC5t33295H Brassica oleracea HOM05D000305 ORTHO05D000065 3.6e-07 58.2 91 42.9
BcaB01g01646 Brassica carinata HOM05D000305 ORTHO05D000065 8.1e-07 57.0 56 53.6
BolC2t08627H Brassica oleracea HOM05D000305 ORTHO05D000065 8.1e-07 57.0 60 58.3
BcaNung01610 Brassica carinata HOM05D000305 ORTHO05D000065 1.4e-06 56.2 59 52.5
BcaB08g35351 Brassica carinata HOM05D000305 ORTHO05D000065 1.8e-06 55.8 47 66.0
C05p14800 Brassica napus HOM05D000305 ORTHO05D000065 1.8e-06 55.8 60 55.0
BcaC05g27327 Brassica carinata HOM05D000305 ORTHO05D000065 2.4e-06 55.5 60 56.7
BolC5t34076H Brassica oleracea HOM05D000305 ORTHO05D000065 2.4e-06 55.5 60 55.0
BcaC05g28766 Brassica carinata HOM05D000305 ORTHO05D000065 4.0e-06 54.7 60 53.3
BcaB03g16215 Brassica carinata HOM05D000305 ORTHO05D000065 5.2e-06 54.3 78 42.3
BcaNung06384 Brassica carinata HOM05D000305 ORTHO05D000605 5.2e-06 54.3 60 55.0
C05p54110 Brassica napus HOM05D000305 ORTHO05D000065 5.2e-06 54.3 60 55.0
BcaB05g23131 Brassica carinata HOM05D000305 ORTHO05D000065 9.0e-06 53.5 61 54.1


User provided reference genes

Program Settings