Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10745 Brassica carinata HOM05D007759 ORTHO05D008318 7.4e-80 300.4 147 100.0
C04p25470 Brassica napus HOM05D007759 ORTHO05D008318 7.4e-80 300.4 147 100.0
BolC4t24065H Brassica oleracea HOM05D007759 ORTHO05D008318 7.4e-80 300.4 147 100.0
BcaC02g10768 Brassica carinata HOM05D007759 ORTHO05D008318 5.3e-70 267.7 142 92.3
C04p25320 Brassica napus HOM05D007759 ORTHO05D008318 5.3e-70 267.7 142 92.3
BolC6t36449H Brassica oleracea HOM05D007759 ORTHO05D008318 1.3e-63 246.5 146 84.9
BcaC02g11605 Brassica carinata HOM05D007759 ORTHO05D008318 6.9e-62 240.7 146 81.5
C04p13390 Brassica napus HOM05D007759 ORTHO05D008318 6.9e-62 240.7 146 81.5
BcaC05g28733 Brassica carinata HOM05D007759 ORTHO05D008318 9.0e-62 240.4 146 80.1
BolC5t33570H Brassica oleracea HOM05D007759 ORTHO05D008318 9.0e-62 240.4 146 80.1
C01p19090 Brassica napus HOM05D007759 ORTHO05D008318 1.0e-60 236.9 146 82.2
BcaC05g27963 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-59 233.0 146 80.1
A09p35430 Brassica napus HOM05D007759 ORTHO05D008318 9.4e-59 230.3 146 78.8
BraA08t32106Z Brassica rapa HOM05D007759 ORTHO05D008318 6.1e-58 227.6 146 78.1
BcaB04g19215 Brassica carinata HOM05D007759 ORTHO05D008318 2.3e-57 225.7 146 76.0
C01p11620 Brassica napus HOM05D007759 ORTHO05D008318 2.9e-52 208.8 146 75.3
BcaC04g21104 Brassica carinata HOM05D007759 ORTHO05D008318 3.8e-52 208.4 146 74.7
BcaC08g43908 Brassica carinata HOM05D007759 ORTHO05D008318 6.5e-52 207.6 125 84.8
C06p12950 Brassica napus HOM05D007759 ORTHO05D008318 6.5e-52 207.6 125 84.8
BolC6t39089H Brassica oleracea HOM05D007759 ORTHO05D008318 6.5e-52 207.6 125 84.8
A07p09660 Brassica napus HOM05D007759 ORTHO05D008318 1.4e-51 206.5 144 71.5
BraA02t06461Z Brassica rapa HOM05D007759 ORTHO05D008318 5.5e-51 204.5 144 70.8
BcaC04g19163 Brassica carinata HOM05D007759 ORTHO05D008318 9.4e-51 203.8 124 85.5
C09p64240 Brassica napus HOM05D007759 ORTHO05D008318 9.4e-51 203.8 124 85.5
BolC9t59261H Brassica oleracea HOM05D007759 ORTHO05D008318 9.4e-51 203.8 124 85.5
A03p64890 Brassica napus HOM05D007759 ORTHO05D008318 3.6e-50 201.8 144 70.1
BcaNung02441 Brassica carinata HOM05D007759 ORTHO05D008318 6.1e-50 201.1 146 68.5
A09p61940 Brassica napus HOM05D007759 ORTHO05D008318 6.7e-49 197.6 144 68.1
A05p45000 Brassica napus HOM05D007759 ORTHO05D008318 1.1e-48 196.8 144 67.4
A09p55860 Brassica napus HOM05D007759 ORTHO05D008318 1.5e-48 196.4 124 80.6
BraA09t40989Z Brassica rapa HOM05D007759 ORTHO05D008318 1.5e-48 196.4 124 80.6
A05p25410 Brassica napus HOM05D007759 ORTHO05D008318 4.4e-48 194.9 144 66.0
C09p35650 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-47 193.4 120 81.7
BolC9t56401H Brassica oleracea HOM05D007759 ORTHO05D008318 1.3e-47 193.4 120 81.7
BcaC01g00595 Brassica carinata HOM05D007759 ORTHO05D008318 1.7e-47 193.0 128 77.3
A07p18500 Brassica napus HOM05D007759 ORTHO05D008318 9.1e-46 187.2 145 62.8
BcaC09g50938 Brassica carinata HOM05D007759 ORTHO05D008318 3.4e-45 185.3 146 69.2
C03p87080 Brassica napus HOM05D007759 ORTHO05D008318 5.9e-45 184.5 119 83.2
A05p26180 Brassica napus HOM05D007759 ORTHO05D008318 8.5e-44 180.6 145 61.4
A04p16590 Brassica napus HOM05D007759 ORTHO05D008318 1.1e-43 180.3 145 62.1
A07p25500 Brassica napus HOM05D007759 ORTHO05D008318 1.4e-43 179.9 145 62.1
BolC6t39668H Brassica oleracea HOM05D000305 ORTHO05D000065 2.5e-43 179.1 145 61.4
BcaC08g46655 Brassica carinata HOM05D007759 ORTHO05D008318 3.2e-43 178.7 145 61.4
BraA05t20148Z Brassica rapa HOM05D007759 ORTHO05D008318 4.2e-43 178.3 126 68.3
BcaC01g02224 Brassica carinata HOM05D007759 ORTHO05D008318 5.5e-43 177.9 144 61.1
BcaC03g17946 Brassica carinata HOM05D007759 ORTHO05D008318 5.5e-43 177.9 145 60.7
C03p67680 Brassica napus HOM05D007759 ORTHO05D008318 5.5e-43 177.9 144 61.1
BraA06t24735Z Brassica rapa HOM05D007759 ORTHO05D008318 7.2e-43 177.6 125 72.0
A09p15820 Brassica napus HOM05D007759 ORTHO05D008318 9.4e-43 177.2 145 60.7
BolSC21t60227H Brassica oleracea HOM05D007759 ORTHO05D008318 9.4e-43 177.2 144 61.1
BolC1t01835H Brassica oleracea HOM05D007759 ORTHO05D008318 1.6e-42 176.4 107 83.2
BraA03t13280Z Brassica rapa HOM05D007759 ORTHO05D008318 1.6e-42 176.4 126 65.9
BcaB06g26374 Brassica carinata HOM05D007759 ORTHO05D008318 3.6e-42 175.3 113 79.6
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 4.7e-42 174.9 146 60.3
C02p60070 Brassica napus HOM05D000305 ORTHO05D000065 6.1e-42 174.5 145 59.3
BolC5t31112H Brassica oleracea HOM05D007759 ORTHO05D008318 1.8e-41 172.9 102 84.3
BraA03t15551Z Brassica rapa HOM05D007759 ORTHO05D008318 1.8e-41 172.9 125 70.4
A09p16180 Brassica napus HOM05D000305 ORTHO05D000065 2.3e-41 172.6 145 59.3
C01p16160 Brassica napus HOM05D007759 ORTHO05D008318 3.9e-41 171.8 104 86.5
BraA09t37253Z Brassica rapa HOM05D000305 ORTHO05D000065 3.9e-41 171.8 145 59.3
BraA05t23159Z Brassica rapa HOM05D007759 ORTHO05D008318 1.1e-40 170.2 126 64.3
BcaB01g03487 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-38 163.3 125 69.6
BolC3t21010H Brassica oleracea HOM05D007759 ORTHO05D008318 1.4e-38 163.3 101 84.2
BcaB03g12128 Brassica carinata HOM05D007759 ORTHO05D008318 4.1e-38 161.8 125 68.8
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 3.3e-32 142.1 111 66.7
C05p39710 Brassica napus HOM05D007759 ORTHO05D008318 1.7e-31 139.8 93 75.3
BcaC04g21617 Brassica carinata HOM05D007759 ORTHO05D008318 3.7e-31 138.7 106 68.9
C01p16170 Brassica napus HOM05D007759 ORTHO05D008318 3.2e-27 125.6 102 70.6
BolC4t24039H Brassica oleracea HOM05D007759 ORTHO05D008318 3.0e-25 119.0 64 93.8
A08p07380 Brassica napus HOM05D000305 ORTHO05D008318 1.5e-24 116.7 146 44.5
BraA08t32755Z Brassica rapa HOM05D007759 ORTHO05D008318 1.5e-24 116.7 146 44.5
C05p36840 Brassica napus HOM05D000305 ORTHO05D008318 4.4e-24 115.2 146 42.5
BcaC05g27701 Brassica carinata HOM05D007759 ORTHO05D008318 9.8e-24 114.0 146 42.5
BcaC09g51523 Brassica carinata HOM05D007759 ORTHO05D008318 2.8e-23 112.5 146 42.5
BcaB02g07732 Brassica carinata HOM05D007759 ORTHO05D008318 1.8e-22 109.8 146 39.0
BolC5t32424H Brassica oleracea HOM05D000305 ORTHO05D008318 4.5e-21 105.1 148 41.2
C08p12830 Brassica napus HOM05D007759 ORTHO05D008318 8.6e-20 100.9 123 46.3
A06p29370 Brassica napus HOM05D007759 ORTHO05D008318 1.5e-19 100.1 74 68.9
BcaNung04086 Brassica carinata HOM05D007759 ORTHO05D008318 3.6e-18 95.5 70 70.0
BcaC01g00980 Brassica carinata HOM05D007759 ORTHO05D008318 1.5e-16 90.1 57 84.2
A08p19220 Brassica napus HOM05D007759 ORTHO05D008318 2.0e-16 89.7 64 75.0
BraA08t33884Z Brassica rapa HOM05D007759 ORTHO05D008318 2.0e-16 89.7 64 75.0
BolC6t37317H Brassica oleracea HOM05D007759 ORTHO05D008318 4.9e-15 85.1 146 35.6
BcaC09g50078 Brassica carinata HOM05D000305 ORTHO05D000065 3.1e-14 82.4 146 34.9
BcaB07g32952 Brassica carinata HOM05D007759 ORTHO05D008318 2.0e-13 79.7 56 75.0
A05p10430 Brassica napus HOM05D007759 ORTHO05D008318 3.5e-13 79.0 64 64.1
A09p01240 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-12 77.0 57 66.7
Carub.0001s4072 Capsella rubella HOM05D007759 ORTHO05D008318 1.3e-12 77.0 149 31.5
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-12 75.9 125 34.4
BolC8t47656H Brassica oleracea HOM05D000096 ORTHO05D000045 2.9e-12 75.9 125 34.4
Carub.0003s3131 Capsella rubella HOM05D007759 ORTHO05D008318 2.9e-12 75.9 149 31.5
Thhalv10002215m.g Eutrema salsugineum HOM05D007759 ORTHO05D008318 5.0e-12 75.1 148 33.8
BcaC05g27285 Brassica carinata HOM05D009716 ORTHO05D008318 1.1e-11 73.9 110 34.5
BolC8t48618H Brassica oleracea HOM05D009716 ORTHO05D008318 1.9e-11 73.2 110 33.6
BraA04t15920Z Brassica rapa HOM05D009716 ORTHO05D008318 3.3e-11 72.4 116 32.8
BolC7t43125H Brassica oleracea HOM05D009716 ORTHO05D008318 1.6e-10 70.1 110 33.6
AL4G17992 Arabidopsis lyrata HOM05D007759 ORTHO05D008318 1.0e-09 67.4 77 42.9
BcaB06g26970 Brassica carinata HOM05D007759 ORTHO05D008318 1.8e-09 66.6 69 44.9
BcaC02g08813 Brassica carinata HOM05D009716 ORTHO05D008318 3.7e-07 58.9 86 34.9
C01p29370 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-06 57.0 126 32.5
BolC1t02858H Brassica oleracea HOM05D007759 ORTHO05D008318 1.9e-06 56.6 126 32.5


User provided reference genes

Program Settings