Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 2.0e-181 639.0 330 100.0
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 1.4e-155 553.1 330 87.3
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-154 549.7 330 88.5
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 5.0e-153 544.7 330 86.4
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 1.8e-150 536.2 333 85.3
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 2.6e-149 532.3 333 86.2
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 1.7e-145 519.6 330 82.7
BolC9t57206H Brassica oleracea HOM05D008386 ORTHO05D010572 7.1e-107 391.3 298 73.8
BolC8t48816H Brassica oleracea HOM05D008386 ORTHO05D010572 4.0e-94 349.0 232 82.3
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 6.1e-82 308.5 181 87.3
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 2.4e-78 296.6 218 77.5
BcaB08g35499 Brassica carinata HOM05D008386 ORTHO05D010572 4.5e-69 265.8 181 75.1
BcaB04g18086 Brassica carinata HOM05D008386 ORTHO05D010572 8.5e-68 261.5 169 77.5
BcaB08g35205 Brassica carinata HOM05D008386 ORTHO05D010572 4.7e-66 255.8 189 71.4
BcaC03g15124 Brassica carinata HOM05D008386 ORTHO05D010572 4.4e-64 249.2 148 85.8
BcaC07g38207 Brassica carinata HOM05D008386 ORTHO05D010572 5.5e-59 232.3 212 66.0
BcaC01g01840 Brassica carinata HOM05D008386 ORTHO05D010572 1.4e-57 227.6 135 83.7
BolC3t20162H Brassica oleracea HOM05D008386 ORTHO05D010572 1.3e-55 221.1 142 87.3
BcaC02g10719 Brassica carinata HOM05D008386 ORTHO05D010572 8.0e-50 201.8 121 83.5
BcaC02g11959 Brassica carinata HOM05D008386 ORTHO05D010572 7.5e-48 195.3 122 79.5
BcaC02g10590 Brassica carinata HOM05D008386 ORTHO05D010572 2.2e-47 193.7 122 80.3
BcaC02g10596 Brassica carinata HOM05D008386 ORTHO05D010572 3.5e-45 186.4 122 79.5
BcaC07g38132 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-42 177.6 91 91.2
BraA01t02430Z Brassica rapa HOM05D008386 ORTHO05D010572 9.2e-38 161.8 135 59.3
BolC2t10380H Brassica oleracea HOM05D008386 ORTHO05D010572 7.8e-37 158.7 107 79.4
BraA05t21497Z Brassica rapa HOM05D008386 ORTHO05D010572 1.3e-36 157.9 233 44.2
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-36 156.4 133 63.2
BolC3t19363H Brassica oleracea HOM05D008386 ORTHO05D010572 3.9e-36 156.4 92 88.0
BcaC04g19411 Brassica carinata HOM05D008386 ORTHO05D010572 3.6e-34 149.8 80 95.0
BcaC09g48736 Brassica carinata HOM05D008386 ORTHO05D010572 6.8e-33 145.6 80 92.5
BcaC03g16484 Brassica carinata HOM05D008386 ORTHO05D010572 1.2e-32 144.8 93 81.7
BcaC08g43797 Brassica carinata HOM05D008386 ORTHO05D010572 8.3e-31 138.7 93 78.5
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 8.3e-31 138.7 249 33.3
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 1.9e-30 137.5 287 31.7
BcaC03g16924 Brassica carinata HOM05D008386 ORTHO05D010572 4.1e-30 136.3 93 79.6
BcaC07g37356 Brassica carinata HOM05D008386 ORTHO05D010572 9.2e-30 135.2 93 79.6
BcaC01g02055 Brassica carinata HOM05D008386 ORTHO05D010572 1.2e-29 134.8 93 77.4
BcaC04g21029 Brassica carinata HOM05D008386 ORTHO05D010572 6.0e-29 132.5 93 76.3
BcaC09g49728 Brassica carinata HOM05D008386 ORTHO05D010572 1.3e-28 131.3 94 77.7
BolC1t03080H Brassica oleracea HOM05D008386 ORTHO05D010572 1.7e-28 131.0 123 56.1
BcaC05g27677 Brassica carinata HOM05D008386 ORTHO05D010572 3.0e-28 130.2 83 79.5
BcaC07g37355 Brassica carinata HOM05D008386 ORTHO05D010572 2.5e-27 127.1 86 82.6
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 5.2e-25 119.4 61 88.5
BcaC09g49407 Brassica carinata HOM05D008386 ORTHO05D010572 2.0e-24 117.5 67 86.6
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-24 117.1 59 91.5
BcaC01g02121 Brassica carinata HOM05D008386 ORTHO05D010572 3.4e-24 116.7 86 76.7
BraA02t07645Z Brassica rapa HOM05D008386 ORTHO05D010572 4.1e-22 109.8 161 46.0
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 6.6e-20 102.4 246 32.9
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 6.6e-20 102.4 242 33.5
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-18 98.2 287 28.6
BcaC04g20758 Brassica carinata HOM05D008386 ORTHO05D010572 2.1e-18 97.4 62 82.3
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-18 95.9 283 31.4
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 1.1e-17 95.1 248 31.9
BolC7t41206H Brassica oleracea HOM05D008386 ORTHO05D010572 1.1e-17 95.1 60 83.3
BcaC03g16923 Brassica carinata HOM05D008386 ORTHO05D010572 8.9e-17 92.0 56 83.9
BcaC06g36237 Brassica carinata HOM05D008386 ORTHO05D010572 1.2e-16 91.7 53 90.6
BolC6t38412H Brassica oleracea HOM05D008386 ORTHO05D010572 1.2e-16 91.7 92 54.3
BcaC02g10591 Brassica carinata HOM05D008386 ORTHO05D010572 2.0e-16 90.9 64 78.1
BcaC03g16398 Brassica carinata HOM05D008386 ORTHO05D010572 2.0e-16 90.9 60 78.3
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-16 90.9 261 28.4
BcaC06g35840 Brassica carinata HOM05D006121 ORTHO05D013509 3.4e-16 90.1 226 31.0
BcaC04g20825 Brassica carinata HOM05D008386 ORTHO05D010572 9.9e-16 88.6 53 81.1
BcaC04g23560 Brassica carinata HOM05D006121 ORTHO05D013509 1.3e-15 88.2 225 31.1
BcaC02g10895 Brassica carinata HOM05D006121 ORTHO05D013509 4.9e-15 86.3 223 32.3
BcaC03g18509 Brassica carinata HOM05D006121 ORTHO05D013509 6.4e-15 85.9 220 29.5
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 1.2e-13 81.6 269 26.8
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 6.0e-13 79.3 280 26.4
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-12 77.4 280 26.4
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 8.6e-12 75.5 187 30.5
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 8.1e-10 68.9 61 59.0
BcaC01g01789 Brassica carinata HOM05D006121 ORTHO05D013509 1.1e-09 68.6 100 37.0
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-09 65.9 242 24.0
CARHR119460 Cardamine hirsuta HOM05D008386 ORTHO05D010572 6.8e-09 65.9 208 29.8
BcaC07g37146 Brassica carinata HOM05D006121 ORTHO05D013509 3.4e-08 63.5 98 38.8
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 5.8e-08 62.8 149 28.9
CARHR216340 Cardamine hirsuta HOM05D008386 ORTHO05D010572 7.6e-08 62.4 101 35.6
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-07 60.1 92 38.0
BraA05t21496Z Brassica rapa HOM05D000633 ORTHO05D000477 6.4e-07 59.3 191 26.7
BcaC03g16666 Brassica carinata HOM05D006121 ORTHO05D013509 1.1e-06 58.5 70 44.3
BcaC01g00175 Brassica carinata HOM05D006121 ORTHO05D013509 1.4e-06 58.2 84 40.5
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-06 57.8 98 38.8
BcaC07g37520 Brassica carinata HOM05D008386 ORTHO05D010572 2.4e-06 57.4 91 38.5
A04p08210 Brassica napus HOM05D008386 ORTHO05D010572 4.2e-06 56.6 39 71.8
BcaC01g01841 Brassica carinata HOM05D006121 ORTHO05D013509 7.1e-06 55.8 70 42.9
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 7.1e-06 55.8 215 27.4


User provided reference genes

Program Settings