Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10657 Brassica carinata HOM05D009590 ORTHO05D014118 2.7e-100 368.6 182 100.0
C04p26320 Brassica napus HOM05D009590 ORTHO05D042950 1.1e-72 276.9 158 88.0
BolC4t24175H Brassica oleracea HOM05D009590 ORTHO05D042950 1.1e-72 276.9 158 88.0
BcaC06g36732 Brassica carinata HOM05D009590 ORTHO05D014118 6.8e-59 231.1 161 72.7
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 1.8e-56 223.0 153 70.6
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 1.8e-56 223.0 153 70.6
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 1.1e-53 213.8 153 64.7
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 7.0e-48 194.5 151 60.3
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 8.6e-46 187.6 153 60.1
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 8.9e-43 177.6 153 57.5
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 3.4e-42 175.6 153 56.9
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 1.5e-37 160.2 135 58.5
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 1.2e-34 150.6 138 52.9
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 1.8e-27 126.7 149 46.3
BcaC04g20540 Brassica carinata HOM05D009590 ORTHO05D014118 1.7e-25 120.2 87 58.6
Sp5g15830 Schrenkiella parvula HOM05D001959 ORTHO05D001955 2.4e-19 99.8 131 42.7
Sp6g09970 Schrenkiella parvula HOM05D009590 ORTHO05D014118 4.0e-19 99.0 86 53.5
A01p27590 Brassica napus HOM05D009590 ORTHO05D014118 6.9e-19 98.2 115 47.0
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 2.6e-18 96.3 159 34.0
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 5.8e-18 95.1 167 34.7
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 9.9e-18 94.4 108 41.7
BraA01t02653Z Brassica rapa HOM05D009117 ORTHO05D012204 4.9e-17 92.0 108 40.7
BcaC04g21233 Brassica carinata HOM05D009590 ORTHO05D014118 8.4e-17 91.3 65 61.5
BcaC03g16331 Brassica carinata HOM05D009590 ORTHO05D014118 1.1e-16 90.9 128 43.0
A09p37280 Brassica napus HOM05D009117 ORTHO05D012204 1.1e-16 90.9 108 39.8
A03p68140 Brassica napus HOM05D009117 ORTHO05D012204 1.4e-16 90.5 108 39.8
C02p27840 Brassica napus HOM05D009117 ORTHO05D012204 1.4e-16 90.5 108 39.8
C02p28440 Brassica napus HOM05D009117 ORTHO05D012204 1.4e-16 90.5 108 39.8
C07p19280 Brassica napus HOM05D009117 ORTHO05D012204 1.4e-16 90.5 108 39.8
BolC2t08887H Brassica oleracea HOM05D009117 ORTHO05D012204 1.4e-16 90.5 108 39.8
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 4.2e-16 89.0 135 34.8
A02p20020 Brassica napus HOM05D009117 ORTHO05D012204 9.3e-16 87.8 106 38.7
A09p17260 Brassica napus HOM05D009117 ORTHO05D012204 9.3e-16 87.8 106 38.7
BolC1t02526H Brassica oleracea HOM05D009117 ORTHO05D012204 2.1e-15 86.7 108 38.9
C01p25760 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-14 84.0 108 38.0
BcaC08g43055 Brassica carinata HOM05D009117 ORTHO05D024074 3.3e-13 79.3 117 32.5
BolC7t41869H Brassica oleracea HOM05D009117 ORTHO05D012204 3.3e-13 79.3 100 37.0
BcaC03g14057 Brassica carinata HOM05D009590 ORTHO05D014118 5.6e-13 78.6 65 56.9
C09p34070 Brassica napus HOM05D009590 ORTHO05D020087 5.3e-11 72.0 40 85.0
BolC9t56243H Brassica oleracea HOM05D009590 ORTHO05D020087 5.3e-11 72.0 40 85.0
Sp1g39000 Schrenkiella parvula HOM05D009590 ORTHO05D372274 5.8e-10 68.6 47 63.8


User provided reference genes

Program Settings