Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-88 329.7 164 100.0
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 4.4e-65 251.5 125 100.0
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-64 250.0 125 99.2
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 3.5e-62 241.9 182 69.8
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 5.0e-61 238.0 180 71.7
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 1.1e-60 236.9 156 79.5
BraA01t02030Z Brassica rapa HOM05D035072 ORTHO05D003352 3.9e-37 158.7 92 88.0
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 2.5e-28 129.4 127 51.2
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 5.6e-28 128.3 127 51.2
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-27 126.7 127 50.4
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-27 126.7 126 50.8
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-27 126.3 127 50.4
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-27 125.9 127 49.6
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-27 125.9 127 50.4
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-27 125.9 127 49.6
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-27 125.6 127 49.6
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-27 125.6 127 49.6
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 8.1e-27 124.4 127 48.8
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 8.1e-27 124.4 127 48.8
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-26 124.0 127 48.8
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-26 123.2 127 48.8
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-26 122.9 146 45.9
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-26 122.5 127 48.8
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-26 120.9 105 59.0
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-25 120.6 144 44.4
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-25 119.8 121 47.9
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 2.0e-25 119.8 121 47.9
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-24 117.1 130 50.8
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-24 116.3 133 47.4
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-24 116.3 131 44.3
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 2.2e-24 116.3 131 44.3
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-24 115.9 123 46.3
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 6.4e-24 114.8 136 47.8
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-23 114.0 127 47.2
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-23 114.0 117 48.7
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-23 113.2 128 44.5
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 2.4e-23 112.8 144 42.4
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-23 112.1 122 46.7
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-23 111.7 122 45.9
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 5.4e-23 111.7 144 42.4
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-23 110.9 131 45.8
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 3.5e-22 109.0 117 47.0
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 6.0e-22 108.2 130 46.9
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-22 107.8 129 45.0
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-22 107.8 129 46.5
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-22 107.8 131 44.3
A08p00890 Brassica napus HOM05D035072 ORTHO05D041723 7.8e-22 107.8 64 87.5
BraA08t32145Z Brassica rapa HOM05D035072 ORTHO05D041723 1.0e-21 107.5 64 87.5
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-21 106.7 131 45.0
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-21 106.7 131 44.3
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-21 105.9 131 44.3
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 3.9e-21 105.5 134 41.8
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 5.1e-21 105.1 117 47.0
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-21 104.8 127 45.7
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-21 104.4 127 44.9
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 1.1e-20 104.0 89 60.7
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 1.1e-20 104.0 89 60.7
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-20 102.4 131 42.0
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-20 101.3 144 40.3
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-19 100.1 128 43.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-19 99.4 109 52.3
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-19 99.0 142 38.0
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-19 98.6 90 54.4
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-18 97.4 132 43.9
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-18 97.4 142 38.0
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-18 97.4 142 38.0
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-18 96.7 111 45.0
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-18 96.7 111 45.0
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-17 94.0 93 51.6
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-17 94.0 90 52.2
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-17 93.6 152 36.2
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-17 93.2 109 45.0
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 2.0e-17 93.2 109 45.0
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-17 92.8 94 47.9
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 7.6e-17 91.3 134 34.3
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 7.6e-17 91.3 112 37.5
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 7.6e-17 91.3 112 37.5
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 4.2e-15 85.5 75 53.3
BcaC08g43741 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-15 85.1 67 61.2
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-14 84.0 109 42.2
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-14 83.6 154 34.4
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-14 82.0 140 34.3
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-14 82.0 140 34.3
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.6e-14 82.0 132 34.1
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 7.8e-14 81.3 121 36.4
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-13 80.1 80 55.0
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-13 79.7 92 47.8
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-13 79.7 117 39.3
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 2.3e-13 79.7 120 35.8
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 3.0e-13 79.3 112 33.9
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-13 78.2 154 33.8
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 6.6e-13 78.2 91 44.0
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-12 77.4 100 37.0
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.5e-12 77.0 163 31.3
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-12 76.6 97 41.2
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-12 76.3 95 44.2
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-12 76.3 84 40.5
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-12 76.3 100 36.0
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 2.5e-12 76.3 115 38.3
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 3.3e-12 75.9 111 34.2
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-12 75.9 84 42.9
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 5.6e-12 75.1 89 42.7
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 7.3e-12 74.7 100 41.0
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 7.3e-12 74.7 100 38.0
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 7.3e-12 74.7 103 35.0
BcaC06g35795 Brassica carinata HOM05D000115 ORTHO05D011879 1.6e-11 73.6 59 66.1
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-11 73.6 83 42.2
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-11 73.6 140 31.4
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-11 73.6 140 31.4
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-11 73.6 140 31.4
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 2.1e-11 73.2 140 33.6
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 2.1e-11 73.2 89 38.2
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-11 72.4 102 37.3
BraA05t20816Z Brassica rapa HOM05D003839 ORTHO05D020172 4.7e-11 72.0 80 51.2
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-10 70.1 133 30.1
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.8e-10 70.1 107 34.6
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-10 69.3 63 50.8
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.1e-10 69.3 138 31.9
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 5.2e-10 68.6 90 40.0
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 5.2e-10 68.6 82 40.2
BcaB03g14108 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-09 67.4 85 43.5
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-09 67.4 77 39.0
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-09 67.4 77 39.0
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 2.0e-09 66.6 106 36.8
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.4e-09 65.9 74 43.2
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-09 65.1 89 37.1
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 7.6e-09 64.7 78 44.9
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 9.9e-09 64.3 88 38.6
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.7e-08 63.5 89 36.0
BolC5t34293H Brassica oleracea HOM05D021406 ORTHO05D020172 1.7e-08 63.5 49 59.2
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-08 63.2 74 39.2
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-08 63.2 67 47.8
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-08 62.0 90 37.8
BcaC08g44281 Brassica carinata HOM05D003839 ORTHO05D039180 6.4e-08 61.6 85 37.6
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 1.1e-07 60.8 102 29.4
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-07 60.5 49 55.1
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 1.9e-07 60.1 89 36.0
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 1.9e-07 60.1 89 36.0
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 1.9e-07 60.1 89 36.0
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-07 59.7 91 36.3
BolC8t47719H Brassica oleracea HOM05D000096 ORTHO05D000045 2.4e-07 59.7 91 36.3
BcaC01g05021 Brassica carinata HOM05D003839 ORTHO05D095186 4.2e-07 58.9 51 60.8
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 4.2e-07 58.9 89 34.8
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 4.2e-07 58.9 89 34.8
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 7.1e-07 58.2 63 39.7
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 1.2e-06 57.4 53 52.8
C05p49230 Brassica napus HOM05D003839 ORTHO05D032372 1.2e-06 57.4 49 55.1
BolC9t54875H Brassica oleracea HOM05D003839 ORTHO05D019911 1.6e-06 57.0 78 39.7
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 2.7e-06 56.2 138 28.3
BcaC04g22402 Brassica carinata HOM05D040257 ORTHO05D032373 2.7e-06 56.2 91 34.1
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 2.7e-06 56.2 80 36.2
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-06 55.8 54 46.3
BolC5t33664H Brassica oleracea HOM05D003839 ORTHO05D032372 4.6e-06 55.5 45 55.6
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 6.0e-06 55.1 79 32.9
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 7.8e-06 54.7 124 29.8
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 7.8e-06 54.7 134 26.9


User provided reference genes

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