Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 1.0e-230 803.1 430 100.0
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 1.9e-221 772.3 499 86.2
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 3.9e-206 721.5 475 85.3
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 1.4e-187 659.8 463 79.0
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 1.8e-171 606.3 473 73.8
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 2.9e-169 599.0 482 72.2
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 8.5e-169 597.4 482 71.6
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 8.5e-169 597.4 482 71.6
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 3.7e-164 582.0 466 70.4
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 2.3e-158 562.8 466 68.0
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 1.2e-157 560.5 466 68.0
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 8.3e-156 554.3 466 66.1
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 3.4e-149 532.3 450 67.1
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 1.1e-134 484.2 466 59.4
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 2.4e-123 446.4 485 56.1
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 1.3e-111 407.5 465 50.3
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 1.4e-110 404.1 206 99.5
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 8.4e-108 394.8 463 48.4
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 6.0e-106 388.7 464 48.1
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 1.3e-105 387.5 462 49.6
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 1.1e-104 384.4 462 48.9
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 9.6e-104 381.3 465 50.1
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 2.0e-101 373.6 462 47.0
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 9.9e-101 371.3 463 46.9
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 9.3e-99 364.8 463 47.3
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 3.9e-97 359.4 466 45.1
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.8e-95 352.4 451 47.5
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 6.2e-95 352.1 310 67.1
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 6.2e-95 352.1 463 46.2
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 9.0e-94 348.2 462 43.7
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 9.0e-94 348.2 462 44.8
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.2e-93 347.8 462 43.9
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 3.4e-93 346.3 460 42.8
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 5.8e-93 345.5 465 44.1
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.7e-92 344.0 463 45.6
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 2.2e-92 343.6 463 43.2
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 3.8e-92 342.8 462 42.9
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 6.5e-92 342.0 465 44.3
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 8.4e-92 341.7 400 48.2
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 1.4e-91 340.9 444 45.7
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 2.1e-90 337.0 462 43.1
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 4.6e-90 335.9 463 44.7
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 3.9e-89 332.8 569 38.3
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 1.1e-88 331.3 398 47.2
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.6e-87 327.4 465 44.3
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 2.1e-87 327.0 463 41.5
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 2.8e-87 326.6 465 43.2
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 1.8e-86 323.9 415 46.5
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 5.3e-86 322.4 498 39.6
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 4.5e-85 319.3 464 42.0
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.9e-83 313.9 462 41.1
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 4.2e-83 312.8 617 36.3
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 5.5e-83 312.4 454 43.4
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 1.2e-82 311.2 462 40.0
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 1.0e-81 308.1 463 41.3
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 5.1e-81 305.8 465 40.6
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 6.7e-81 305.4 455 41.8
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.5e-80 304.3 420 42.9
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 7.4e-80 302.0 420 42.9
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 1.3e-79 301.2 394 44.7
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 1.6e-79 300.8 464 40.7
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 3.7e-79 299.7 458 42.6
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 8.2e-79 298.5 465 37.8
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.1e-78 298.1 464 40.1
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.8e-78 297.4 469 40.9
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 1.8e-78 297.4 462 41.3
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 5.3e-78 295.8 465 42.4
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 9.0e-78 295.0 491 39.1
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 2.6e-77 293.5 465 40.0
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 5.9e-77 292.4 463 39.7
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.3e-76 291.2 440 42.0
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.2e-76 290.4 469 40.3
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 2.9e-76 290.0 466 41.2
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.9e-75 287.3 464 38.1
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 1.9e-75 287.3 159 100.0
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 3.2e-75 286.6 462 39.2
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 3.2e-75 286.6 470 41.5
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 4.2e-75 286.2 462 38.3
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.2e-74 284.6 484 37.4
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 3.6e-74 283.1 465 38.9
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 1.4e-73 281.2 328 49.4
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.3e-73 280.4 348 48.6
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 5.1e-73 279.3 465 38.7
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 5.1e-73 279.3 465 36.3
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 5.1e-73 279.3 427 40.0
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 5.7e-72 275.8 461 38.0
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 7.4e-72 275.4 484 36.4
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.7e-71 274.2 446 40.4
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 2.2e-71 273.9 461 37.7
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 5.3e-70 269.2 455 38.5
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 4.5e-69 266.2 463 39.1
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.0e-68 265.0 405 41.0
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 1.7e-68 264.2 455 37.4
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 2.9e-68 263.5 465 37.8
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 2.7e-66 256.9 475 37.9
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 8.8e-65 251.9 273 50.5
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 7.4e-64 248.8 464 36.0
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.3e-63 248.1 466 36.3
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 6.3e-63 245.7 462 34.4
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 1.8e-62 244.2 467 36.4
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 9.1e-62 241.9 375 40.0
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.5e-61 241.1 462 34.2
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 1.0e-60 238.4 465 34.4
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 8.5e-60 235.3 464 35.1
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 1.1e-59 235.0 464 36.0
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 3.2e-59 233.4 466 34.5
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 3.6e-58 229.9 423 37.4
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 3.6e-58 229.9 470 35.7
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 3.3e-56 223.4 221 52.0
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.7e-55 221.1 382 36.4
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 6.3e-55 219.2 312 43.3
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 8.2e-55 218.8 476 33.2
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.2e-52 210.7 340 39.4
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 8.5e-52 208.8 461 30.8
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 3.6e-50 203.4 246 46.3
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 8.0e-50 202.2 433 37.4
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 1.4e-49 201.4 375 36.5
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 1.4e-49 201.4 331 40.2
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.7e-48 196.1 383 36.0
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 7.5e-48 195.7 416 32.5
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 3.2e-43 180.3 466 29.4
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 8.8e-41 172.2 206 42.7
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 6.3e-39 166.0 635 24.4
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.0e-36 158.7 466 27.5
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 3.8e-36 156.8 236 38.6
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 3.6e-34 150.2 457 28.2
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 1.5e-27 128.3 220 40.5
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.0e-24 117.9 278 30.6
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 3.4e-24 117.1 361 28.8
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 5.8e-24 116.3 173 45.7
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 7.5e-24 115.9 183 38.8
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 1.7e-23 114.8 213 39.4
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.9e-22 111.3 363 28.9
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 1.2e-21 108.6 97 52.6
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 1.3e-20 105.1 435 24.1
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 8.6e-20 102.4 268 30.2
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 2.3e-17 94.4 457 24.7
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 5.8e-16 89.7 149 41.6
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.3e-15 88.6 99 44.4
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 2.9e-15 87.4 107 49.5
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 2.9e-15 87.4 209 31.1
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 3.7e-15 87.0 74 62.2
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 2.4e-14 84.3 82 54.9
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.2e-14 84.0 72 51.4
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 7.8e-13 79.3 372 25.0
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 5.1e-12 76.6 136 39.7
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 8.1e-10 69.3 94 43.6
COL.COLO4_15711 Corchorus olitorius HOM05D004546 ORTHO05D005419 3.7e-07 60.5 68 50.0
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 6.4e-07 59.7 73 38.4


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