Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-63 246.1 131 100.0
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 1.2e-57 226.5 131 94.7
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 2.3e-53 212.2 111 100.0
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 1.2e-52 209.9 112 98.2
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 2.9e-51 205.3 112 89.3
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 2.9e-51 205.3 112 89.3
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 2.9e-51 205.3 112 89.3
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 1.2e-49 199.9 111 96.4
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.2e-42 175.3 121 66.1
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.1e-38 162.5 132 59.8
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 6.4e-35 151.0 130 53.1
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.1e-34 150.2 131 51.9
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.9e-32 141.7 131 47.3
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 7.4e-31 137.5 131 47.3
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 9.6e-31 137.1 133 48.9
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 9.6e-31 137.1 133 48.1
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 8.1e-30 134.0 133 48.1
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 8.1e-30 134.0 133 48.1
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-29 133.7 128 48.4
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 1.4e-29 133.3 132 47.7
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 5.3e-29 131.3 135 47.4
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 6.9e-29 131.0 132 47.0
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 9.0e-29 130.6 134 43.3
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 2.6e-28 129.0 129 46.5
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 9.9e-28 127.1 131 45.8
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.9e-28 127.1 131 43.5
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-27 125.9 131 44.3
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 2.2e-27 125.9 131 42.7
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 2.2e-27 125.9 131 44.3
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 2.9e-27 125.6 114 48.2
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 2.9e-27 125.6 114 48.2
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 3.8e-27 125.2 131 42.7
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 8.4e-27 124.0 131 42.7
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.6e-25 119.8 131 42.0
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 4.6e-25 118.2 131 43.5
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 4.6e-25 118.2 131 43.5
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 4.6e-25 118.2 131 43.5
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 6.0e-25 117.9 117 44.4
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 6.0e-25 117.9 131 43.5
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 1.0e-24 117.1 131 43.5
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 1.0e-24 117.1 131 43.5
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-24 116.7 131 42.7
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.3e-24 116.7 131 42.7
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 2.3e-24 115.9 131 42.7
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.1e-24 114.8 107 46.7
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 6.7e-24 114.4 131 42.7
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 6.7e-24 114.4 131 42.7
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 1.5e-23 113.2 104 47.1
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.5e-23 113.2 131 44.3
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 4.3e-23 111.7 131 41.2
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-22 110.2 131 38.9
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 1.3e-22 110.2 131 38.9
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 4.8e-22 108.2 135 38.5
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 1.4e-21 106.7 133 38.3
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 1.5e-20 103.2 112 46.4
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.0e-20 102.8 131 42.0
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 5.8e-20 101.3 86 52.3
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 7.6e-20 100.9 132 40.9
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 7.6e-20 100.9 103 45.6
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.3e-19 100.1 113 43.4
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.7e-19 99.8 128 37.5
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.7e-19 99.8 132 36.4
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 4.9e-19 98.2 132 37.1
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 2.5e-18 95.9 132 40.2
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 1.2e-17 93.6 128 42.2
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 2.1e-17 92.8 131 37.4
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 2.1e-17 92.8 95 46.3
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 2.7e-17 92.4 131 36.6
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 2.7e-17 92.4 131 36.6
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 4.6e-17 91.7 131 35.1
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 4.6e-17 91.7 137 35.8
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-16 90.5 103 39.8
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 1.0e-16 90.5 127 37.0
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.8e-16 89.7 128 36.7
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 5.1e-16 88.2 131 39.7
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.7e-16 87.8 107 38.3
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.1e-15 87.0 132 36.4
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.1e-15 87.0 107 38.3
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 4.8e-14 81.6 132 31.1
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 8.2e-14 80.9 133 36.1
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 1.4e-13 80.1 135 32.6
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.1e-13 78.6 104 37.5
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.6e-12 75.9 106 37.7
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 5.9e-12 74.7 131 39.7
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.9e-12 74.7 131 36.6
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 7.6e-12 74.3 131 39.7
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 1.0e-11 73.9 128 31.2
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-11 73.6 131 39.7
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 2.2e-11 72.8 128 31.2
BcaNung02067 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-08 63.5 48 56.2
Eucgr.C02234 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.8e-08 63.2 68 38.2
Eucgr.C02235 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.8e-08 63.2 74 36.5
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.9e-08 62.0 48 50.0
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.1e-08 61.6 48 52.1
Eucgr.C02268 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.7e-08 61.2 68 38.2
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 1.5e-07 60.1 129 27.9
EL10Ac6g13469 Beta vulgaris HOM05D006945 ORTHO05D005549 1.9e-07 59.7 107 38.3
Atru.chr7.821 Acer truncatum HOM05D009688 ORTHO05D005549 6.3e-06 54.7 96 42.7
Prupe.1G079900 Prunus persica HOM05D009688 ORTHO05D005549 6.3e-06 54.7 126 24.6


User provided reference genes

Program Settings