Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10375 Brassica carinata HOM05D031750 ORTHO05D039587 1.4e-57 226.1 116 100.0
C04p29540 Brassica napus HOM05D031750 ORTHO05D039587 4.4e-27 124.8 65 98.5
BraA09t37037Z Brassica rapa HOM05D001427 ORTHO05D001320 1.6e-16 89.7 111 52.3
A09p13900 Brassica napus HOM05D001427 ORTHO05D001320 7.7e-16 87.4 111 51.4
C09p16630 Brassica napus HOM05D001427 ORTHO05D001320 1.7e-15 86.3 117 48.7
BolC9t54566H Brassica oleracea HOM05D001427 ORTHO05D001320 1.7e-15 86.3 114 50.0
BcaC04g22686 Brassica carinata HOM05D001427 ORTHO05D001320 3.8e-15 85.1 117 48.7
BcaB07g31555 Brassica carinata HOM05D001427 ORTHO05D001320 6.5e-15 84.3 111 50.5
Sp2g00930 Schrenkiella parvula HOM05D001427 ORTHO05D001320 1.1e-14 83.6 105 52.4
Carub.0002s0112 Capsella rubella HOM05D001427 ORTHO05D001320 2.5e-14 82.4 104 51.9
BcaC01g00654 Brassica carinata HOM05D031750 ORTHO05D095432 3.2e-14 82.0 66 69.7
Thhalv10023545m.g Eutrema salsugineum HOM05D001427 ORTHO05D001320 1.2e-13 80.1 106 50.0
AL2G11450 Arabidopsis lyrata HOM05D001427 ORTHO05D001320 1.8e-12 76.3 105 50.5
AT1G63720 Arabidopsis thaliana HOM05D001427 ORTHO05D001320 4.0e-12 75.1 105 49.5
CARHR047610 Cardamine hirsuta HOM05D001427 ORTHO05D001320 1.2e-11 73.6 107 46.7
Aa31LG2G940 Aethionema arabicum HOM05D001427 ORTHO05D001320 1.6e-08 63.2 104 44.2
TPR.G12750 Trifolium pratense HOM05D001427 ORTHO05D001320 2.5e-06 55.8 98 41.8
Medtr8g098495 Medicago truncatula HOM05D001427 ORTHO05D001320 3.3e-06 55.5 105 42.9
THA.LOC104809380 Tarenaya hassleriana HOM05D001427 ORTHO05D001320 7.2e-06 54.3 105 41.0


User provided reference genes

Program Settings