Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10338 Brassica carinata HOM05D010136 ORTHO05D012279 2.5e-69 265.4 141 100.0
C04p30170 Brassica napus HOM05D010136 ORTHO05D012279 2.5e-69 265.4 141 100.0
BolC4t24549H Brassica oleracea HOM05D010136 ORTHO05D012279 2.5e-69 265.4 141 100.0
A04p00340 Brassica napus HOM05D010136 ORTHO05D012279 2.6e-66 255.4 141 95.7
BraA04t15752Z Brassica rapa HOM05D010136 ORTHO05D012279 2.6e-66 255.4 141 95.7
BcaB02g08077 Brassica carinata HOM05D010136 ORTHO05D012279 1.6e-60 236.1 141 90.1
Sp5g00480 Schrenkiella parvula HOM05D010136 ORTHO05D012279 2.7e-39 165.6 154 67.5
Thhalv10006362m.g Eutrema salsugineum HOM05D010136 ORTHO05D012279 2.4e-35 152.5 149 63.8
AL5G45840 Arabidopsis lyrata HOM05D010136 ORTHO05D012279 9.4e-24 114.0 142 53.5
CARHR173340 Cardamine hirsuta HOM05D010136 ORTHO05D012279 2.7e-23 112.5 152 53.3
AT3G63050 Arabidopsis thaliana HOM05D010136 ORTHO05D012279 3.6e-23 112.1 147 53.7
Carub.0005s2969 Capsella rubella HOM05D010136 ORTHO05D012279 5.7e-21 104.8 145 52.4
Aa31LG10G16870 Aethionema arabicum HOM05D010136 ORTHO05D012279 1.3e-17 93.6 167 43.1
AL4G47670 Arabidopsis lyrata HOM05D010136 ORTHO05D012279 7.2e-16 87.8 165 43.6
C08p37780 Brassica napus HOM05D010136 ORTHO05D012279 1.6e-15 86.7 82 61.0
AT2G48075 Arabidopsis thaliana HOM05D010136 ORTHO05D012279 2.1e-15 86.3 145 46.2
Thhalv10001665m.g Eutrema salsugineum HOM05D010136 ORTHO05D012279 1.0e-14 84.0 165 41.8
Carub.0004s3078 Capsella rubella HOM05D010136 ORTHO05D012279 1.8e-14 83.2 165 38.2
Sp4g29970 Schrenkiella parvula HOM05D010136 ORTHO05D012279 4.8e-12 75.1 163 38.0
CARHR143470 Cardamine hirsuta HOM05D010136 ORTHO05D012279 5.3e-11 71.6 137 42.3
THA.LOC104823063 Tarenaya hassleriana HOM05D010136 ORTHO05D012279 5.9e-10 68.2 178 34.8
THA.LOC104802221 Tarenaya hassleriana HOM05D010136 ORTHO05D012279 3.6e-07 58.9 117 43.6
BcaB02g08733 Brassica carinata HOM05D010136 ORTHO05D012279 6.7e-06 54.7 80 46.2


User provided reference genes

Program Settings