Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.9e-114 414.8 216 100.0
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-61 238.4 209 71.3
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 3.1e-58 229.2 188 73.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.5e-57 226.9 183 73.2
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.7e-56 222.2 209 67.5
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-55 219.9 168 75.6
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.1e-54 216.5 183 71.6
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 6.0e-54 214.9 179 72.1
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 2.3e-53 213.0 166 75.3
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-53 211.1 209 64.1
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 4.3e-52 208.8 141 81.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.2e-51 207.2 171 70.8
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-51 207.2 171 71.9
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 2.8e-51 206.1 158 75.9
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 3.6e-51 205.7 205 62.0
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 4.7e-51 205.3 173 68.2
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 6.2e-51 204.9 182 67.0
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.8e-50 203.4 140 80.7
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 5.2e-50 201.8 155 74.2
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-49 200.7 141 79.4
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 2.6e-49 199.5 140 78.6
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 2.2e-48 196.4 186 66.1
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 8.4e-48 194.5 171 68.4
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.1e-47 194.1 168 67.9
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 7.1e-47 191.4 203 60.1
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.6e-46 190.3 166 69.3
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.5e-44 183.0 106 92.5
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-43 179.5 163 64.4
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-42 176.8 163 64.4
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.8e-42 176.8 165 67.3
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.8e-42 176.8 163 63.8
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 2.4e-42 176.4 118 82.2
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 3.1e-42 176.0 141 73.0
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 4.0e-42 175.6 118 82.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 6.4e-40 168.3 131 74.8
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-39 167.5 171 62.6
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-39 166.0 163 65.6
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 5.4e-39 165.2 149 65.1
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 9.3e-39 164.5 162 63.0
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 3.5e-38 162.5 162 62.3
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 6.0e-38 161.8 118 77.1
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-37 160.6 131 72.5
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-36 156.8 118 73.7
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 5.6e-36 155.2 136 64.7
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 2.1e-35 153.3 170 61.2
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 2.8e-35 152.9 89 91.0
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.4e-34 149.8 129 66.7
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 4.0e-34 149.1 136 63.2
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 3.4e-33 146.0 101 80.2
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 8.4e-32 141.4 108 72.2
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.9e-31 140.2 121 66.9
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 2.4e-31 139.8 116 69.0
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 6.7e-29 131.7 102 72.5
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-28 129.8 168 56.0
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 3.3e-28 129.4 118 64.4
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 4.3e-28 129.0 131 60.3
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 4.3e-28 129.0 121 62.8
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 5.6e-28 128.6 147 57.8
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 2.1e-27 126.7 110 65.5
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 2.8e-27 126.3 110 65.5
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 3.6e-27 125.9 162 53.1
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.1e-26 124.4 124 59.7
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.4e-26 123.2 128 59.4
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 1.5e-25 120.6 105 65.7
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 2.6e-25 119.8 110 63.6
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 5.8e-25 118.6 94 69.1
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 3.2e-23 112.8 85 71.8
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.2e-22 110.9 108 63.0
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.1e-20 104.4 119 61.3
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.5e-20 104.0 168 46.4
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 7.4e-20 101.7 121 54.5
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 3.7e-19 99.4 129 53.5
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 4.8e-19 99.0 90 66.7
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 8.1e-19 98.2 161 45.3
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.8e-18 97.1 144 48.6
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.8e-18 97.1 156 43.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 3.1e-18 96.3 83 63.9
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 3.1e-18 96.3 72 72.2
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 5.3e-18 95.5 93 60.2
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 9.0e-18 94.7 93 62.4
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.2e-17 94.4 82 64.6
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 1.5e-17 94.0 93 62.4
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 5.8e-17 92.0 112 55.4
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 4.2e-15 85.9 74 63.5
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.0e-13 81.3 87 57.5
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 2.5e-12 76.6 98 53.1
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 4.3e-12 75.9 84 54.8
BcaC09g51817 Brassica carinata HOM05D001498 ORTHO05D096326 5.7e-12 75.5 85 58.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.8e-11 73.2 103 50.5
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.8e-11 72.4 109 46.8
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 4.8e-11 72.4 67 58.2
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 6.3e-11 72.0 102 49.0
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 6.3e-11 72.0 83 54.2
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 6.3e-11 72.0 139 41.7
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 3.4e-09 66.2 106 42.5
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 7.6e-09 65.1 90 48.9
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.9e-08 63.2 88 47.7
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 3.8e-08 62.8 135 40.7
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.4e-07 60.8 152 38.2
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.9e-07 60.5 71 50.7
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.9e-07 60.5 82 48.8
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 1.6e-06 57.4 120 39.2
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 2.7e-06 56.6 66 57.6
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 4.6e-06 55.8 107 39.3
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 4.6e-06 55.8 123 38.2
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 7.9e-06 55.1 107 40.2
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 7.9e-06 55.1 107 41.1
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 7.9e-06 55.1 112 40.2
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 7.9e-06 55.1 168 33.9
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 7.9e-06 55.1 107 41.1


User provided reference genes

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